Gene : Carub.0005s0530 C. rubella v1.1
Defline:  (1 of 2) 1.17.4.2 - Ribonucleoside-triphosphate reductase / Ribonucleotide reductase Genomic Order:  530
Name:  ? Carub.0005s0530 Secondary Identifier:  ? PAC:39224441
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6126 Capsella rubella pathologic  
Crubella PWY-6545 Capsella rubella pathologic  
Crubella PWY-7184 Capsella rubella pathologic  
Crubella PWY-7210 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  
Crubella PWY-7220 Capsella rubella pathologic  
Crubella PWY-7222 Capsella rubella pathologic  
Crubella PWY-7226 Capsella rubella pathologic  
Crubella PWY-7227 Capsella rubella pathologic  
Crubella PWY-7228 Capsella rubella pathologic  
Crubella PWY-7229 Capsella rubella pathologic  
Crubella PWY-841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0530 0.5kb upstream 0.5kb upstream 1499 true scaffold_5: 2139430-2140928 Capsella rubella
Carub.0005s0530 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2140429-2140928 Capsella rubella
Carub.0005s0530 0.5kb downstream 0.5kb downstream 1499 true scaffold_5: 2138930-2140428 Capsella rubella
Carub.0005s0530 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2138930-2139429 Capsella rubella
Carub.0005s0530 1.0kb upstream 1.0kb upstream 1999 true scaffold_5: 2139430-2141428 Capsella rubella
Carub.0005s0530 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2140429-2141428 Capsella rubella
Carub.0005s0530 1.0kb downstream 1.0kb downstream 1999 true scaffold_5: 2138430-2140428 Capsella rubella
Carub.0005s0530 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2138430-2139429 Capsella rubella
Carub.0005s0530 2.0kb upstream 2.0kb upstream 2999 true scaffold_5: 2139430-2142428 Capsella rubella
Carub.0005s0530 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2140429-2142428 Capsella rubella
Carub.0005s0530 2.0kb downstream 2.0kb downstream 2999 true scaffold_5: 2137430-2140428 Capsella rubella
Carub.0005s0530 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2137430-2139429 Capsella rubella
Carub.0005s0530 5.0kb upstream 5.0kb upstream 5999 true scaffold_5: 2139430-2145428 Capsella rubella
Carub.0005s0530 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2140429-2145428 Capsella rubella
Carub.0005s0530 5.0kb downstream 5.0kb downstream 5999 true scaffold_5: 2134430-2140428 Capsella rubella
Carub.0005s0530 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2134430-2139429 Capsella rubella
Carub.0005s0530 10.0kb upstream 10.0kb upstream 10999 true scaffold_5: 2139430-2150428 Capsella rubella
Carub.0005s0530 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2140429-2150428 Capsella rubella
Carub.0005s0530 10.0kb downstream 10.0kb downstream 10999 true scaffold_5: 2129430-2140428 Capsella rubella
Carub.0005s0530 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2129430-2139429 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360169 5261 Brassicaceae View MSA
123832091 5264 Brassicales-Malvales View MSA
124342160 5266 SBM View MSA
124244448 5268 Malvidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain