Gene : Carub.0005s0533 C. rubella v1.1
Defline:  (1 of 2) PTHR10857//PTHR10857:SF43 - COPINE // SUBFAMILY NOT NAMED Genomic Order:  533
Name:  ? Carub.0005s0533 Secondary Identifier:  ? PAC:39226492
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0533 0.5kb upstream 0.5kb upstream 2680 true scaffold_5: 2147231-2149910 Capsella rubella
Carub.0005s0533 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2147231-2147730 Capsella rubella
Carub.0005s0533 0.5kb downstream 0.5kb downstream 2680 true scaffold_5: 2147731-2150410 Capsella rubella
Carub.0005s0533 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2149911-2150410 Capsella rubella
Carub.0005s0533 1.0kb upstream 1.0kb upstream 3180 true scaffold_5: 2146731-2149910 Capsella rubella
Carub.0005s0533 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2146731-2147730 Capsella rubella
Carub.0005s0533 1.0kb downstream 1.0kb downstream 3180 true scaffold_5: 2147731-2150910 Capsella rubella
Carub.0005s0533 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2149911-2150910 Capsella rubella
Carub.0005s0533 2.0kb upstream 2.0kb upstream 4180 true scaffold_5: 2145731-2149910 Capsella rubella
Carub.0005s0533 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2145731-2147730 Capsella rubella
Carub.0005s0533 2.0kb downstream 2.0kb downstream 4180 true scaffold_5: 2147731-2151910 Capsella rubella
Carub.0005s0533 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2149911-2151910 Capsella rubella
Carub.0005s0533 5.0kb upstream 5.0kb upstream 7180 true scaffold_5: 2142731-2149910 Capsella rubella
Carub.0005s0533 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2142731-2147730 Capsella rubella
Carub.0005s0533 5.0kb downstream 5.0kb downstream 7180 true scaffold_5: 2147731-2154910 Capsella rubella
Carub.0005s0533 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2149911-2154910 Capsella rubella
Carub.0005s0533 10.0kb upstream 10.0kb upstream 12180 true scaffold_5: 2137731-2149910 Capsella rubella
Carub.0005s0533 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2137731-2147730 Capsella rubella
Carub.0005s0533 10.0kb downstream 10.0kb downstream 12180 true scaffold_5: 2147731-2159910 Capsella rubella
Carub.0005s0533 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2149911-2159910 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375417 5261 Brassicaceae View MSA
123830882 5264 Brassicales-Malvales View MSA
124336404 5266 SBM View MSA
124241474 5268 Malvidae View MSA
124062843 5270 Rosid View MSA
123750755 5271 Pentapetalae View MSA
122796494 5272 Eudicot View MSA
122041662 5273 Angiosperm View MSA
121346693 5274 Embryophyte View MSA
123380427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain