Gene : Carub.0005s0528 C. rubella v1.1
Defline:  (1 of 47) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  528
Name:  ? Carub.0005s0528 Secondary Identifier:  ? PAC:39226411
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0528 0.5kb upstream 0.5kb upstream 1623 true scaffold_5: 2134234-2135856 Capsella rubella
Carub.0005s0528 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2135357-2135856 Capsella rubella
Carub.0005s0528 0.5kb downstream 0.5kb downstream 1623 true scaffold_5: 2133734-2135356 Capsella rubella
Carub.0005s0528 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2133734-2134233 Capsella rubella
Carub.0005s0528 1.0kb upstream 1.0kb upstream 2123 true scaffold_5: 2134234-2136356 Capsella rubella
Carub.0005s0528 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2135357-2136356 Capsella rubella
Carub.0005s0528 1.0kb downstream 1.0kb downstream 2123 true scaffold_5: 2133234-2135356 Capsella rubella
Carub.0005s0528 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2133234-2134233 Capsella rubella
Carub.0005s0528 2.0kb upstream 2.0kb upstream 3123 true scaffold_5: 2134234-2137356 Capsella rubella
Carub.0005s0528 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2135357-2137356 Capsella rubella
Carub.0005s0528 2.0kb downstream 2.0kb downstream 3123 true scaffold_5: 2132234-2135356 Capsella rubella
Carub.0005s0528 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2132234-2134233 Capsella rubella
Carub.0005s0528 5.0kb upstream 5.0kb upstream 6123 true scaffold_5: 2134234-2140356 Capsella rubella
Carub.0005s0528 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2135357-2140356 Capsella rubella
Carub.0005s0528 5.0kb downstream 5.0kb downstream 6123 true scaffold_5: 2129234-2135356 Capsella rubella
Carub.0005s0528 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2129234-2134233 Capsella rubella
Carub.0005s0528 10.0kb upstream 10.0kb upstream 11123 true scaffold_5: 2134234-2145356 Capsella rubella
Carub.0005s0528 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2135357-2145356 Capsella rubella
Carub.0005s0528 10.0kb downstream 10.0kb downstream 11123 true scaffold_5: 2124234-2135356 Capsella rubella
Carub.0005s0528 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2124234-2134233 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511689 5273 Angiosperm View MSA
122378210 5261 Brassicaceae View MSA
123801788 5264 Brassicales-Malvales View MSA
124299049 5266 SBM View MSA
124150559 5268 Malvidae View MSA
123876152 5270 Rosid View MSA
123459863 5271 Pentapetalae View MSA
122495246 5272 Eudicot View MSA
120784726 5274 Embryophyte View MSA
122826623 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain