Gene : Carub.0005s0544 C. rubella v1.1
Genomic Order:  544 Name:  ? Carub.0005s0544
Secondary Identifier:  ? PAC:39226437
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0544 0.5kb upstream 0.5kb upstream 2801 true scaffold_5: 2194339-2197139 Capsella rubella
Carub.0005s0544 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2196640-2197139 Capsella rubella
Carub.0005s0544 0.5kb downstream 0.5kb downstream 2801 true scaffold_5: 2193839-2196639 Capsella rubella
Carub.0005s0544 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2193839-2194338 Capsella rubella
Carub.0005s0544 1.0kb upstream 1.0kb upstream 3301 true scaffold_5: 2194339-2197639 Capsella rubella
Carub.0005s0544 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2196640-2197639 Capsella rubella
Carub.0005s0544 1.0kb downstream 1.0kb downstream 3301 true scaffold_5: 2193339-2196639 Capsella rubella
Carub.0005s0544 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2193339-2194338 Capsella rubella
Carub.0005s0544 2.0kb upstream 2.0kb upstream 4301 true scaffold_5: 2194339-2198639 Capsella rubella
Carub.0005s0544 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2196640-2198639 Capsella rubella
Carub.0005s0544 2.0kb downstream 2.0kb downstream 4301 true scaffold_5: 2192339-2196639 Capsella rubella
Carub.0005s0544 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2192339-2194338 Capsella rubella
Carub.0005s0544 5.0kb upstream 5.0kb upstream 7301 true scaffold_5: 2194339-2201639 Capsella rubella
Carub.0005s0544 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2196640-2201639 Capsella rubella
Carub.0005s0544 5.0kb downstream 5.0kb downstream 7301 true scaffold_5: 2189339-2196639 Capsella rubella
Carub.0005s0544 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2189339-2194338 Capsella rubella
Carub.0005s0544 10.0kb upstream 10.0kb upstream 12301 true scaffold_5: 2194339-2206639 Capsella rubella
Carub.0005s0544 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2196640-2206639 Capsella rubella
Carub.0005s0544 10.0kb downstream 10.0kb downstream 12301 true scaffold_5: 2184339-2196639 Capsella rubella
Carub.0005s0544 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2184339-2194338 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375879 5261 Brassicaceae View MSA
123838349 5264 Brassicales-Malvales View MSA
124337018 5266 SBM View MSA
124253196 5268 Malvidae View MSA
124073179 5270 Rosid View MSA
123752262 5271 Pentapetalae View MSA
122794539 5272 Eudicot View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain