Gene : Carub.0005s0539 C. rubella v1.1
Defline:  (1 of 2) PTHR21109:SF0 - 28S RIBOSOMAL PROTEIN S21, MITOCHONDRIAL Genomic Order:  539
Name:  ? Carub.0005s0539 Secondary Identifier:  ? PAC:39223964
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0539 0.5kb upstream 0.5kb upstream 1880 true scaffold_5: 2168176-2170055 Capsella rubella
Carub.0005s0539 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2168176-2168675 Capsella rubella
Carub.0005s0539 0.5kb downstream 0.5kb downstream 1880 true scaffold_5: 2168676-2170555 Capsella rubella
Carub.0005s0539 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2170056-2170555 Capsella rubella
Carub.0005s0539 1.0kb upstream 1.0kb upstream 2380 true scaffold_5: 2167676-2170055 Capsella rubella
Carub.0005s0539 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2167676-2168675 Capsella rubella
Carub.0005s0539 1.0kb downstream 1.0kb downstream 2380 true scaffold_5: 2168676-2171055 Capsella rubella
Carub.0005s0539 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2170056-2171055 Capsella rubella
Carub.0005s0539 2.0kb upstream 2.0kb upstream 3380 true scaffold_5: 2166676-2170055 Capsella rubella
Carub.0005s0539 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2166676-2168675 Capsella rubella
Carub.0005s0539 2.0kb downstream 2.0kb downstream 3380 true scaffold_5: 2168676-2172055 Capsella rubella
Carub.0005s0539 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2170056-2172055 Capsella rubella
Carub.0005s0539 5.0kb upstream 5.0kb upstream 6380 true scaffold_5: 2163676-2170055 Capsella rubella
Carub.0005s0539 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2163676-2168675 Capsella rubella
Carub.0005s0539 5.0kb downstream 5.0kb downstream 6380 true scaffold_5: 2168676-2175055 Capsella rubella
Carub.0005s0539 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2170056-2175055 Capsella rubella
Carub.0005s0539 10.0kb upstream 10.0kb upstream 11380 true scaffold_5: 2158676-2170055 Capsella rubella
Carub.0005s0539 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2158676-2168675 Capsella rubella
Carub.0005s0539 10.0kb downstream 10.0kb downstream 11380 true scaffold_5: 2168676-2180055 Capsella rubella
Carub.0005s0539 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2170056-2180055 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027800 5273 Angiosperm View MSA
122371340 5261 Brassicaceae View MSA
123835287 5264 Brassicales-Malvales View MSA
124343449 5266 SBM View MSA
124242624 5268 Malvidae View MSA
124065865 5270 Rosid View MSA
123745699 5271 Pentapetalae View MSA
122793832 5272 Eudicot View MSA
121349916 5274 Embryophyte View MSA
123426860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain