Gene : Carub.0005s0293 C. rubella v1.1
Defline:  (1 of 1) PTHR10741//PTHR10741:SF5 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN-ASSOCIATED PROTEIN X Genomic Order:  293
Name:  ? Carub.0005s0293 Secondary Identifier:  ? PAC:39225613
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0293 0.5kb upstream 0.5kb upstream 2529 true scaffold_5: 1161448-1163976 Capsella rubella
Carub.0005s0293 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1163477-1163976 Capsella rubella
Carub.0005s0293 0.5kb downstream 0.5kb downstream 2529 true scaffold_5: 1160948-1163476 Capsella rubella
Carub.0005s0293 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1160948-1161447 Capsella rubella
Carub.0005s0293 1.0kb upstream 1.0kb upstream 3029 true scaffold_5: 1161448-1164476 Capsella rubella
Carub.0005s0293 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1163477-1164476 Capsella rubella
Carub.0005s0293 1.0kb downstream 1.0kb downstream 3029 true scaffold_5: 1160448-1163476 Capsella rubella
Carub.0005s0293 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1160448-1161447 Capsella rubella
Carub.0005s0293 2.0kb upstream 2.0kb upstream 4029 true scaffold_5: 1161448-1165476 Capsella rubella
Carub.0005s0293 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1163477-1165476 Capsella rubella
Carub.0005s0293 2.0kb downstream 2.0kb downstream 4029 true scaffold_5: 1159448-1163476 Capsella rubella
Carub.0005s0293 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1159448-1161447 Capsella rubella
Carub.0005s0293 5.0kb upstream 5.0kb upstream 7029 true scaffold_5: 1161448-1168476 Capsella rubella
Carub.0005s0293 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1163477-1168476 Capsella rubella
Carub.0005s0293 5.0kb downstream 5.0kb downstream 7029 true scaffold_5: 1156448-1163476 Capsella rubella
Carub.0005s0293 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1156448-1161447 Capsella rubella
Carub.0005s0293 10.0kb upstream 10.0kb upstream 12029 true scaffold_5: 1161448-1173476 Capsella rubella
Carub.0005s0293 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1163477-1173476 Capsella rubella
Carub.0005s0293 10.0kb downstream 10.0kb downstream 12029 true scaffold_5: 1151448-1163476 Capsella rubella
Carub.0005s0293 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1151448-1161447 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365966 5261 Brassicaceae View MSA
123830049 5264 Brassicales-Malvales View MSA
124349785 5266 SBM View MSA
124243030 5268 Malvidae View MSA
124067948 5270 Rosid View MSA
123752005 5271 Pentapetalae View MSA
122788507 5272 Eudicot View MSA
122041771 5273 Angiosperm View MSA
121345786 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain