Gene : Carub.0005s0331 C. rubella v1.1
Defline:  (1 of 4) 4.1.1.50 - Adenosylmethionine decarboxylase / S-adenosyl-L-methionine decarboxylase Genomic Order:  331
Name:  ? Carub.0005s0331 Secondary Identifier:  ? PAC:39226457
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARGSPECAT-PWY Capsella rubella pathologic  
Crubella BSUBPOLYAMSYN-PWY Capsella rubella pathologic  
Crubella PWY-7528 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0331 0.5kb upstream 0.5kb upstream 1892 true scaffold_5: 1326769-1328660 Capsella rubella
Carub.0005s0331 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1328161-1328660 Capsella rubella
Carub.0005s0331 0.5kb downstream 0.5kb downstream 1892 true scaffold_5: 1326269-1328160 Capsella rubella
Carub.0005s0331 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1326269-1326768 Capsella rubella
Carub.0005s0331 1.0kb upstream 1.0kb upstream 2392 true scaffold_5: 1326769-1329160 Capsella rubella
Carub.0005s0331 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1328161-1329160 Capsella rubella
Carub.0005s0331 1.0kb downstream 1.0kb downstream 2392 true scaffold_5: 1325769-1328160 Capsella rubella
Carub.0005s0331 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1325769-1326768 Capsella rubella
Carub.0005s0331 2.0kb upstream 2.0kb upstream 3392 true scaffold_5: 1326769-1330160 Capsella rubella
Carub.0005s0331 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1328161-1330160 Capsella rubella
Carub.0005s0331 2.0kb downstream 2.0kb downstream 3392 true scaffold_5: 1324769-1328160 Capsella rubella
Carub.0005s0331 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1324769-1326768 Capsella rubella
Carub.0005s0331 5.0kb upstream 5.0kb upstream 6392 true scaffold_5: 1326769-1333160 Capsella rubella
Carub.0005s0331 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1328161-1333160 Capsella rubella
Carub.0005s0331 5.0kb downstream 5.0kb downstream 6392 true scaffold_5: 1321769-1328160 Capsella rubella
Carub.0005s0331 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1321769-1326768 Capsella rubella
Carub.0005s0331 10.0kb upstream 10.0kb upstream 11392 true scaffold_5: 1326769-1338160 Capsella rubella
Carub.0005s0331 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1328161-1338160 Capsella rubella
Carub.0005s0331 10.0kb downstream 10.0kb downstream 11392 true scaffold_5: 1316769-1328160 Capsella rubella
Carub.0005s0331 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1316769-1326768 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379400 5261 Brassicaceae View MSA
123841428 5264 Brassicales-Malvales View MSA
124346938 5266 SBM View MSA
124250445 5268 Malvidae View MSA
124073000 5270 Rosid View MSA
123746333 5271 Pentapetalae View MSA
122785858 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain