Gene : Carub.0005s0382 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  382
Name:  ? Carub.0005s0382 Secondary Identifier:  ? PAC:39225059
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0382 0.5kb upstream 0.5kb upstream 2898 true scaffold_5: 1561785-1564682 Capsella rubella
Carub.0005s0382 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1564183-1564682 Capsella rubella
Carub.0005s0382 0.5kb downstream 0.5kb downstream 2898 true scaffold_5: 1561285-1564182 Capsella rubella
Carub.0005s0382 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1561285-1561784 Capsella rubella
Carub.0005s0382 1.0kb upstream 1.0kb upstream 3398 true scaffold_5: 1561785-1565182 Capsella rubella
Carub.0005s0382 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1564183-1565182 Capsella rubella
Carub.0005s0382 1.0kb downstream 1.0kb downstream 3398 true scaffold_5: 1560785-1564182 Capsella rubella
Carub.0005s0382 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1560785-1561784 Capsella rubella
Carub.0005s0382 2.0kb upstream 2.0kb upstream 4398 true scaffold_5: 1561785-1566182 Capsella rubella
Carub.0005s0382 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1564183-1566182 Capsella rubella
Carub.0005s0382 2.0kb downstream 2.0kb downstream 4398 true scaffold_5: 1559785-1564182 Capsella rubella
Carub.0005s0382 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1559785-1561784 Capsella rubella
Carub.0005s0382 5.0kb upstream 5.0kb upstream 7398 true scaffold_5: 1561785-1569182 Capsella rubella
Carub.0005s0382 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1564183-1569182 Capsella rubella
Carub.0005s0382 5.0kb downstream 5.0kb downstream 7398 true scaffold_5: 1556785-1564182 Capsella rubella
Carub.0005s0382 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1556785-1561784 Capsella rubella
Carub.0005s0382 10.0kb upstream 10.0kb upstream 12398 true scaffold_5: 1561785-1574182 Capsella rubella
Carub.0005s0382 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1564183-1574182 Capsella rubella
Carub.0005s0382 10.0kb downstream 10.0kb downstream 12398 true scaffold_5: 1551785-1564182 Capsella rubella
Carub.0005s0382 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1551785-1561784 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026168 5273 Angiosperm View MSA
122374123 5261 Brassicaceae View MSA
123830012 5264 Brassicales-Malvales View MSA
124321646 5266 SBM View MSA
124239541 5268 Malvidae View MSA
124060726 5270 Rosid View MSA
123739079 5271 Pentapetalae View MSA
122791557 5272 Eudicot View MSA
121296211 5274 Embryophyte View MSA
123334413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain