Gene : Carub.0005s0403 C. rubella v1.1
Defline:  (1 of 3) PTHR24012:SF415 - F12A21.10-RELATED Genomic Order:  403
Name:  ? Carub.0005s0403 Secondary Identifier:  ? PAC:39224566
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0403 0.5kb upstream 0.5kb upstream 3417 true scaffold_5: 1621514-1624930 Capsella rubella
Carub.0005s0403 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1621514-1622013 Capsella rubella
Carub.0005s0403 0.5kb downstream 0.5kb downstream 3417 true scaffold_5: 1622014-1625430 Capsella rubella
Carub.0005s0403 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1624931-1625430 Capsella rubella
Carub.0005s0403 1.0kb upstream 1.0kb upstream 3917 true scaffold_5: 1621014-1624930 Capsella rubella
Carub.0005s0403 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1621014-1622013 Capsella rubella
Carub.0005s0403 1.0kb downstream 1.0kb downstream 3917 true scaffold_5: 1622014-1625930 Capsella rubella
Carub.0005s0403 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1624931-1625930 Capsella rubella
Carub.0005s0403 2.0kb upstream 2.0kb upstream 4917 true scaffold_5: 1620014-1624930 Capsella rubella
Carub.0005s0403 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1620014-1622013 Capsella rubella
Carub.0005s0403 2.0kb downstream 2.0kb downstream 4917 true scaffold_5: 1622014-1626930 Capsella rubella
Carub.0005s0403 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1624931-1626930 Capsella rubella
Carub.0005s0403 5.0kb upstream 5.0kb upstream 7917 true scaffold_5: 1617014-1624930 Capsella rubella
Carub.0005s0403 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1617014-1622013 Capsella rubella
Carub.0005s0403 5.0kb downstream 5.0kb downstream 7917 true scaffold_5: 1622014-1629930 Capsella rubella
Carub.0005s0403 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1624931-1629930 Capsella rubella
Carub.0005s0403 10.0kb upstream 10.0kb upstream 12917 true scaffold_5: 1612014-1624930 Capsella rubella
Carub.0005s0403 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1612014-1622013 Capsella rubella
Carub.0005s0403 10.0kb downstream 10.0kb downstream 12917 true scaffold_5: 1622014-1634930 Capsella rubella
Carub.0005s0403 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1624931-1634930 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376553 5261 Brassicaceae View MSA
123840445 5264 Brassicales-Malvales View MSA
124338331 5266 SBM View MSA
124239893 5268 Malvidae View MSA
124070321 5270 Rosid View MSA
123745062 5271 Pentapetalae View MSA
122789647 5272 Eudicot View MSA
122044254 5273 Angiosperm View MSA
121348969 5274 Embryophyte View MSA
123381105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain