Gene : Carub.0005s0406 C. rubella v1.1
Defline:  (1 of 2) PF00150//PF00652 - Cellulase (glycosyl hydrolase family 5) (Cellulase) // Ricin-type beta-trefoil lectin domain (Ricin_B_lectin) Genomic Order:  406
Name:  ? Carub.0005s0406 Secondary Identifier:  ? PAC:39225438
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0406 0.5kb upstream 0.5kb upstream 2861 true scaffold_5: 1631650-1634510 Capsella rubella
Carub.0005s0406 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1634011-1634510 Capsella rubella
Carub.0005s0406 0.5kb downstream 0.5kb downstream 2861 true scaffold_5: 1631150-1634010 Capsella rubella
Carub.0005s0406 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1631150-1631649 Capsella rubella
Carub.0005s0406 1.0kb upstream 1.0kb upstream 3361 true scaffold_5: 1631650-1635010 Capsella rubella
Carub.0005s0406 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1634011-1635010 Capsella rubella
Carub.0005s0406 1.0kb downstream 1.0kb downstream 3361 true scaffold_5: 1630650-1634010 Capsella rubella
Carub.0005s0406 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1630650-1631649 Capsella rubella
Carub.0005s0406 2.0kb upstream 2.0kb upstream 4361 true scaffold_5: 1631650-1636010 Capsella rubella
Carub.0005s0406 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1634011-1636010 Capsella rubella
Carub.0005s0406 2.0kb downstream 2.0kb downstream 4361 true scaffold_5: 1629650-1634010 Capsella rubella
Carub.0005s0406 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1629650-1631649 Capsella rubella
Carub.0005s0406 5.0kb upstream 5.0kb upstream 7361 true scaffold_5: 1631650-1639010 Capsella rubella
Carub.0005s0406 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1634011-1639010 Capsella rubella
Carub.0005s0406 5.0kb downstream 5.0kb downstream 7361 true scaffold_5: 1626650-1634010 Capsella rubella
Carub.0005s0406 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1626650-1631649 Capsella rubella
Carub.0005s0406 10.0kb upstream 10.0kb upstream 12361 true scaffold_5: 1631650-1644010 Capsella rubella
Carub.0005s0406 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1634011-1644010 Capsella rubella
Carub.0005s0406 10.0kb downstream 10.0kb downstream 12361 true scaffold_5: 1621650-1634010 Capsella rubella
Carub.0005s0406 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1621650-1631649 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510695 5273 Angiosperm View MSA
122367147 5261 Brassicaceae View MSA
123799304 5264 Brassicales-Malvales View MSA
124296838 5266 SBM View MSA
124148880 5268 Malvidae View MSA
123874793 5270 Rosid View MSA
123458717 5271 Pentapetalae View MSA
122494116 5272 Eudicot View MSA
121351116 5274 Embryophyte View MSA
123426514 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain