Gene : Carub.0005s0717 C. rubella v1.1
Defline:  (1 of 6) PF04601 - Domain of unknown function (DUF569) (DUF569) Genomic Order:  717
Name:  ? Carub.0005s0717 Secondary Identifier:  ? PAC:39225981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0717 0.5kb upstream 0.5kb upstream 1645 true scaffold_5: 3014122-3015766 Capsella rubella
Carub.0005s0717 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3014122-3014621 Capsella rubella
Carub.0005s0717 0.5kb downstream 0.5kb downstream 1645 true scaffold_5: 3014622-3016266 Capsella rubella
Carub.0005s0717 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3015767-3016266 Capsella rubella
Carub.0005s0717 1.0kb upstream 1.0kb upstream 2145 true scaffold_5: 3013622-3015766 Capsella rubella
Carub.0005s0717 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3013622-3014621 Capsella rubella
Carub.0005s0717 1.0kb downstream 1.0kb downstream 2145 true scaffold_5: 3014622-3016766 Capsella rubella
Carub.0005s0717 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3015767-3016766 Capsella rubella
Carub.0005s0717 2.0kb upstream 2.0kb upstream 3145 true scaffold_5: 3012622-3015766 Capsella rubella
Carub.0005s0717 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3012622-3014621 Capsella rubella
Carub.0005s0717 2.0kb downstream 2.0kb downstream 3145 true scaffold_5: 3014622-3017766 Capsella rubella
Carub.0005s0717 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3015767-3017766 Capsella rubella
Carub.0005s0717 5.0kb upstream 5.0kb upstream 6145 true scaffold_5: 3009622-3015766 Capsella rubella
Carub.0005s0717 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3009622-3014621 Capsella rubella
Carub.0005s0717 5.0kb downstream 5.0kb downstream 6145 true scaffold_5: 3014622-3020766 Capsella rubella
Carub.0005s0717 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3015767-3020766 Capsella rubella
Carub.0005s0717 10.0kb upstream 10.0kb upstream 11145 true scaffold_5: 3004622-3015766 Capsella rubella
Carub.0005s0717 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3004622-3014621 Capsella rubella
Carub.0005s0717 10.0kb downstream 10.0kb downstream 11145 true scaffold_5: 3014622-3025766 Capsella rubella
Carub.0005s0717 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3015767-3025766 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362496 5261 Brassicaceae View MSA
123838664 5264 Brassicales-Malvales View MSA
124322486 5266 SBM View MSA
124249792 5268 Malvidae View MSA
124067257 5270 Rosid View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain