Gene : Carub.0005s0728 C. rubella v1.1
Defline:  (1 of 1) K09272 - structure-specific recognition protein 1 (SSRP1) Genomic Order:  728
Name:  ? Carub.0005s0728 Secondary Identifier:  ? PAC:39225165
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0728 0.5kb upstream 0.5kb upstream 4438 true scaffold_5: 3080088-3084525 Capsella rubella
Carub.0005s0728 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3080088-3080587 Capsella rubella
Carub.0005s0728 0.5kb downstream 0.5kb downstream 4438 true scaffold_5: 3080588-3085025 Capsella rubella
Carub.0005s0728 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3084526-3085025 Capsella rubella
Carub.0005s0728 1.0kb upstream 1.0kb upstream 4938 true scaffold_5: 3079588-3084525 Capsella rubella
Carub.0005s0728 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3079588-3080587 Capsella rubella
Carub.0005s0728 1.0kb downstream 1.0kb downstream 4938 true scaffold_5: 3080588-3085525 Capsella rubella
Carub.0005s0728 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3084526-3085525 Capsella rubella
Carub.0005s0728 2.0kb upstream 2.0kb upstream 5938 true scaffold_5: 3078588-3084525 Capsella rubella
Carub.0005s0728 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3078588-3080587 Capsella rubella
Carub.0005s0728 2.0kb downstream 2.0kb downstream 5938 true scaffold_5: 3080588-3086525 Capsella rubella
Carub.0005s0728 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3084526-3086525 Capsella rubella
Carub.0005s0728 5.0kb upstream 5.0kb upstream 8938 true scaffold_5: 3075588-3084525 Capsella rubella
Carub.0005s0728 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3075588-3080587 Capsella rubella
Carub.0005s0728 5.0kb downstream 5.0kb downstream 8938 true scaffold_5: 3080588-3089525 Capsella rubella
Carub.0005s0728 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3084526-3089525 Capsella rubella
Carub.0005s0728 10.0kb upstream 10.0kb upstream 13938 true scaffold_5: 3070588-3084525 Capsella rubella
Carub.0005s0728 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3070588-3080587 Capsella rubella
Carub.0005s0728 10.0kb downstream 10.0kb downstream 13938 true scaffold_5: 3080588-3094525 Capsella rubella
Carub.0005s0728 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3084526-3094525 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376863 5261 Brassicaceae View MSA
123835840 5264 Brassicales-Malvales View MSA
124342073 5266 SBM View MSA
124242721 5268 Malvidae View MSA
124060640 5270 Rosid View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain