Gene : Carub.0005s0725 C. rubella v1.1
Defline:  (1 of 2) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D) Genomic Order:  725
Name:  ? Carub.0005s0725 Secondary Identifier:  ? PAC:39224210
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0725 0.5kb upstream 0.5kb upstream 3179 true scaffold_5: 3069885-3073063 Capsella rubella
Carub.0005s0725 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3069885-3070384 Capsella rubella
Carub.0005s0725 0.5kb downstream 0.5kb downstream 3179 true scaffold_5: 3070385-3073563 Capsella rubella
Carub.0005s0725 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3073064-3073563 Capsella rubella
Carub.0005s0725 1.0kb upstream 1.0kb upstream 3679 true scaffold_5: 3069385-3073063 Capsella rubella
Carub.0005s0725 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3069385-3070384 Capsella rubella
Carub.0005s0725 1.0kb downstream 1.0kb downstream 3679 true scaffold_5: 3070385-3074063 Capsella rubella
Carub.0005s0725 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3073064-3074063 Capsella rubella
Carub.0005s0725 2.0kb upstream 2.0kb upstream 4679 true scaffold_5: 3068385-3073063 Capsella rubella
Carub.0005s0725 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3068385-3070384 Capsella rubella
Carub.0005s0725 2.0kb downstream 2.0kb downstream 4679 true scaffold_5: 3070385-3075063 Capsella rubella
Carub.0005s0725 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3073064-3075063 Capsella rubella
Carub.0005s0725 5.0kb upstream 5.0kb upstream 7679 true scaffold_5: 3065385-3073063 Capsella rubella
Carub.0005s0725 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3065385-3070384 Capsella rubella
Carub.0005s0725 5.0kb downstream 5.0kb downstream 7679 true scaffold_5: 3070385-3078063 Capsella rubella
Carub.0005s0725 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3073064-3078063 Capsella rubella
Carub.0005s0725 10.0kb upstream 10.0kb upstream 12679 true scaffold_5: 3060385-3073063 Capsella rubella
Carub.0005s0725 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3060385-3070384 Capsella rubella
Carub.0005s0725 10.0kb downstream 10.0kb downstream 12679 true scaffold_5: 3070385-3083063 Capsella rubella
Carub.0005s0725 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3073064-3083063 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381644 5261 Brassicaceae View MSA
123836842 5264 Brassicales-Malvales View MSA
124345235 5266 SBM View MSA
124242151 5268 Malvidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain