Gene : Carub.0005s0776 C. rubella v1.1
Defline:  (1 of 1) 5.4.99.56 - Tirucalladienol synthase Genomic Order:  776
Name:  ? Carub.0005s0776 Secondary Identifier:  ? PAC:39226440
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0776 0.5kb upstream 0.5kb upstream 4285 true scaffold_5: 3407530-3411814 Capsella rubella
Carub.0005s0776 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3411315-3411814 Capsella rubella
Carub.0005s0776 0.5kb downstream 0.5kb downstream 4285 true scaffold_5: 3407030-3411314 Capsella rubella
Carub.0005s0776 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3407030-3407529 Capsella rubella
Carub.0005s0776 1.0kb upstream 1.0kb upstream 4785 true scaffold_5: 3407530-3412314 Capsella rubella
Carub.0005s0776 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3411315-3412314 Capsella rubella
Carub.0005s0776 1.0kb downstream 1.0kb downstream 4785 true scaffold_5: 3406530-3411314 Capsella rubella
Carub.0005s0776 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3406530-3407529 Capsella rubella
Carub.0005s0776 2.0kb upstream 2.0kb upstream 5785 true scaffold_5: 3407530-3413314 Capsella rubella
Carub.0005s0776 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3411315-3413314 Capsella rubella
Carub.0005s0776 2.0kb downstream 2.0kb downstream 5785 true scaffold_5: 3405530-3411314 Capsella rubella
Carub.0005s0776 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3405530-3407529 Capsella rubella
Carub.0005s0776 5.0kb upstream 5.0kb upstream 8785 true scaffold_5: 3407530-3416314 Capsella rubella
Carub.0005s0776 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3411315-3416314 Capsella rubella
Carub.0005s0776 5.0kb downstream 5.0kb downstream 8785 true scaffold_5: 3402530-3411314 Capsella rubella
Carub.0005s0776 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3402530-3407529 Capsella rubella
Carub.0005s0776 10.0kb upstream 10.0kb upstream 13785 true scaffold_5: 3407530-3421314 Capsella rubella
Carub.0005s0776 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3411315-3421314 Capsella rubella
Carub.0005s0776 10.0kb downstream 10.0kb downstream 13785 true scaffold_5: 3397530-3411314 Capsella rubella
Carub.0005s0776 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3397530-3407529 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
122378105 5261 Brassicaceae View MSA
123841722 5264 Brassicales-Malvales View MSA
124351667 5266 SBM View MSA
124245550 5268 Malvidae View MSA
124052067 5270 Rosid View MSA
123750414 5271 Pentapetalae View MSA
122773643 5272 Eudicot View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain