Gene : Carub.0005s0779 C. rubella v1.1
Defline:  (1 of 5) PTHR22811//PTHR22811:SF47 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  779
Name:  ? Carub.0005s0779 Secondary Identifier:  ? PAC:39224605
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0779 0.5kb upstream 0.5kb upstream 1421 true scaffold_5: 3437576-3438996 Capsella rubella
Carub.0005s0779 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3437576-3438075 Capsella rubella
Carub.0005s0779 0.5kb downstream 0.5kb downstream 1421 true scaffold_5: 3438076-3439496 Capsella rubella
Carub.0005s0779 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3438997-3439496 Capsella rubella
Carub.0005s0779 1.0kb upstream 1.0kb upstream 1921 true scaffold_5: 3437076-3438996 Capsella rubella
Carub.0005s0779 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3437076-3438075 Capsella rubella
Carub.0005s0779 1.0kb downstream 1.0kb downstream 1921 true scaffold_5: 3438076-3439996 Capsella rubella
Carub.0005s0779 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3438997-3439996 Capsella rubella
Carub.0005s0779 2.0kb upstream 2.0kb upstream 2921 true scaffold_5: 3436076-3438996 Capsella rubella
Carub.0005s0779 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3436076-3438075 Capsella rubella
Carub.0005s0779 2.0kb downstream 2.0kb downstream 2921 true scaffold_5: 3438076-3440996 Capsella rubella
Carub.0005s0779 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3438997-3440996 Capsella rubella
Carub.0005s0779 5.0kb upstream 5.0kb upstream 5921 true scaffold_5: 3433076-3438996 Capsella rubella
Carub.0005s0779 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3433076-3438075 Capsella rubella
Carub.0005s0779 5.0kb downstream 5.0kb downstream 5921 true scaffold_5: 3438076-3443996 Capsella rubella
Carub.0005s0779 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3438997-3443996 Capsella rubella
Carub.0005s0779 10.0kb upstream 10.0kb upstream 10921 true scaffold_5: 3428076-3438996 Capsella rubella
Carub.0005s0779 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3428076-3438075 Capsella rubella
Carub.0005s0779 10.0kb downstream 10.0kb downstream 10921 true scaffold_5: 3438076-3448996 Capsella rubella
Carub.0005s0779 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3438997-3448996 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375750 5261 Brassicaceae View MSA
123801042 5264 Brassicales-Malvales View MSA
124298387 5266 SBM View MSA
124150042 5268 Malvidae View MSA
124070301 5270 Rosid View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain