Gene : Carub.0005s0623 C. rubella v1.1
Defline:  (1 of 3) K08913 - light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2) Genomic Order:  623
Name:  ? Carub.0005s0623 Secondary Identifier:  ? PAC:39225810
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0623 0.5kb upstream 0.5kb upstream 1565 true scaffold_5: 2559883-2561447 Capsella rubella
Carub.0005s0623 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2559883-2560382 Capsella rubella
Carub.0005s0623 0.5kb downstream 0.5kb downstream 1565 true scaffold_5: 2560383-2561947 Capsella rubella
Carub.0005s0623 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2561448-2561947 Capsella rubella
Carub.0005s0623 1.0kb upstream 1.0kb upstream 2065 true scaffold_5: 2559383-2561447 Capsella rubella
Carub.0005s0623 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2559383-2560382 Capsella rubella
Carub.0005s0623 1.0kb downstream 1.0kb downstream 2065 true scaffold_5: 2560383-2562447 Capsella rubella
Carub.0005s0623 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2561448-2562447 Capsella rubella
Carub.0005s0623 2.0kb upstream 2.0kb upstream 3065 true scaffold_5: 2558383-2561447 Capsella rubella
Carub.0005s0623 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2558383-2560382 Capsella rubella
Carub.0005s0623 2.0kb downstream 2.0kb downstream 3065 true scaffold_5: 2560383-2563447 Capsella rubella
Carub.0005s0623 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2561448-2563447 Capsella rubella
Carub.0005s0623 5.0kb upstream 5.0kb upstream 6065 true scaffold_5: 2555383-2561447 Capsella rubella
Carub.0005s0623 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2555383-2560382 Capsella rubella
Carub.0005s0623 5.0kb downstream 5.0kb downstream 6065 true scaffold_5: 2560383-2566447 Capsella rubella
Carub.0005s0623 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2561448-2566447 Capsella rubella
Carub.0005s0623 10.0kb upstream 10.0kb upstream 11065 true scaffold_5: 2550383-2561447 Capsella rubella
Carub.0005s0623 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2550383-2560382 Capsella rubella
Carub.0005s0623 10.0kb downstream 10.0kb downstream 11065 true scaffold_5: 2560383-2571447 Capsella rubella
Carub.0005s0623 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2561448-2571447 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
122380433 5261 Brassicaceae View MSA
123832323 5264 Brassicales-Malvales View MSA
124343907 5266 SBM View MSA
124251420 5268 Malvidae View MSA
124062505 5270 Rosid View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain