Gene : Carub.0005s0640 C. rubella v1.1
Defline:  (1 of 2) PTHR10366:SF388 - CINNAMOYL COA REDUCTASE-LIKE PROTEIN Genomic Order:  640
Name:  ? Carub.0005s0640 Secondary Identifier:  ? PAC:39226236
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-361 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0640 0.5kb upstream 0.5kb upstream 2949 true scaffold_5: 2627007-2629955 Capsella rubella
Carub.0005s0640 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2629456-2629955 Capsella rubella
Carub.0005s0640 0.5kb downstream 0.5kb downstream 2949 true scaffold_5: 2626507-2629455 Capsella rubella
Carub.0005s0640 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2626507-2627006 Capsella rubella
Carub.0005s0640 1.0kb upstream 1.0kb upstream 3449 true scaffold_5: 2627007-2630455 Capsella rubella
Carub.0005s0640 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2629456-2630455 Capsella rubella
Carub.0005s0640 1.0kb downstream 1.0kb downstream 3449 true scaffold_5: 2626007-2629455 Capsella rubella
Carub.0005s0640 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2626007-2627006 Capsella rubella
Carub.0005s0640 2.0kb upstream 2.0kb upstream 4449 true scaffold_5: 2627007-2631455 Capsella rubella
Carub.0005s0640 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2629456-2631455 Capsella rubella
Carub.0005s0640 2.0kb downstream 2.0kb downstream 4449 true scaffold_5: 2625007-2629455 Capsella rubella
Carub.0005s0640 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2625007-2627006 Capsella rubella
Carub.0005s0640 5.0kb upstream 5.0kb upstream 7449 true scaffold_5: 2627007-2634455 Capsella rubella
Carub.0005s0640 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2629456-2634455 Capsella rubella
Carub.0005s0640 5.0kb downstream 5.0kb downstream 7449 true scaffold_5: 2622007-2629455 Capsella rubella
Carub.0005s0640 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2622007-2627006 Capsella rubella
Carub.0005s0640 10.0kb upstream 10.0kb upstream 12449 true scaffold_5: 2627007-2639455 Capsella rubella
Carub.0005s0640 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2629456-2639455 Capsella rubella
Carub.0005s0640 10.0kb downstream 10.0kb downstream 12449 true scaffold_5: 2617007-2629455 Capsella rubella
Carub.0005s0640 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2617007-2627006 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380457 5261 Brassicaceae View MSA
123838997 5264 Brassicales-Malvales View MSA
124345323 5266 SBM View MSA
124236858 5268 Malvidae View MSA
124060434 5270 Rosid View MSA
123740788 5271 Pentapetalae View MSA
122786439 5272 Eudicot View MSA
122047901 5273 Angiosperm View MSA
121310812 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain