Gene : Carub.0005s0686 C. rubella v1.1
Defline:  (1 of 1) PF11802 - Centromere-associated protein K (CENP-K) Genomic Order:  686
Name:  ? Carub.0005s0686 Secondary Identifier:  ? PAC:39226108
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0686 0.5kb upstream 0.5kb upstream 3183 true scaffold_5: 2892924-2896106 Capsella rubella
Carub.0005s0686 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2892924-2893423 Capsella rubella
Carub.0005s0686 0.5kb downstream 0.5kb downstream 3183 true scaffold_5: 2893424-2896606 Capsella rubella
Carub.0005s0686 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2896107-2896606 Capsella rubella
Carub.0005s0686 1.0kb upstream 1.0kb upstream 3683 true scaffold_5: 2892424-2896106 Capsella rubella
Carub.0005s0686 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2892424-2893423 Capsella rubella
Carub.0005s0686 1.0kb downstream 1.0kb downstream 3683 true scaffold_5: 2893424-2897106 Capsella rubella
Carub.0005s0686 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2896107-2897106 Capsella rubella
Carub.0005s0686 2.0kb upstream 2.0kb upstream 4683 true scaffold_5: 2891424-2896106 Capsella rubella
Carub.0005s0686 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2891424-2893423 Capsella rubella
Carub.0005s0686 2.0kb downstream 2.0kb downstream 4683 true scaffold_5: 2893424-2898106 Capsella rubella
Carub.0005s0686 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2896107-2898106 Capsella rubella
Carub.0005s0686 5.0kb upstream 5.0kb upstream 7683 true scaffold_5: 2888424-2896106 Capsella rubella
Carub.0005s0686 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2888424-2893423 Capsella rubella
Carub.0005s0686 5.0kb downstream 5.0kb downstream 7683 true scaffold_5: 2893424-2901106 Capsella rubella
Carub.0005s0686 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2896107-2901106 Capsella rubella
Carub.0005s0686 10.0kb upstream 10.0kb upstream 12683 true scaffold_5: 2883424-2896106 Capsella rubella
Carub.0005s0686 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2883424-2893423 Capsella rubella
Carub.0005s0686 10.0kb downstream 10.0kb downstream 12683 true scaffold_5: 2893424-2906106 Capsella rubella
Carub.0005s0686 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2896107-2906106 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026351 5273 Angiosperm View MSA
122372495 5261 Brassicaceae View MSA
123836791 5264 Brassicales-Malvales View MSA
124342357 5266 SBM View MSA
124243134 5268 Malvidae View MSA
124037199 5270 Rosid View MSA
123745496 5271 Pentapetalae View MSA
122786734 5272 Eudicot View MSA
121296290 5274 Embryophyte View MSA
123334480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain