Gene : Carub.0005s0989 C. rubella v1.1
Defline:  (1 of 105) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  989
Name:  ? Carub.0005s0989 Secondary Identifier:  ? PAC:39226679
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0989 0.5kb upstream 0.5kb upstream 968 true scaffold_5: 5869494-5870461 Capsella rubella
Carub.0005s0989 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5869494-5869993 Capsella rubella
Carub.0005s0989 0.5kb downstream 0.5kb downstream 968 true scaffold_5: 5869994-5870961 Capsella rubella
Carub.0005s0989 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5870462-5870961 Capsella rubella
Carub.0005s0989 1.0kb upstream 1.0kb upstream 1468 true scaffold_5: 5868994-5870461 Capsella rubella
Carub.0005s0989 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5868994-5869993 Capsella rubella
Carub.0005s0989 1.0kb downstream 1.0kb downstream 1468 true scaffold_5: 5869994-5871461 Capsella rubella
Carub.0005s0989 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5870462-5871461 Capsella rubella
Carub.0005s0989 2.0kb upstream 2.0kb upstream 2468 true scaffold_5: 5867994-5870461 Capsella rubella
Carub.0005s0989 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5867994-5869993 Capsella rubella
Carub.0005s0989 2.0kb downstream 2.0kb downstream 2468 true scaffold_5: 5869994-5872461 Capsella rubella
Carub.0005s0989 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5870462-5872461 Capsella rubella
Carub.0005s0989 5.0kb upstream 5.0kb upstream 5468 true scaffold_5: 5864994-5870461 Capsella rubella
Carub.0005s0989 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5864994-5869993 Capsella rubella
Carub.0005s0989 5.0kb downstream 5.0kb downstream 5468 true scaffold_5: 5869994-5875461 Capsella rubella
Carub.0005s0989 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5870462-5875461 Capsella rubella
Carub.0005s0989 10.0kb upstream 10.0kb upstream 10468 true scaffold_5: 5859994-5870461 Capsella rubella
Carub.0005s0989 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5859994-5869993 Capsella rubella
Carub.0005s0989 10.0kb downstream 10.0kb downstream 10468 true scaffold_5: 5869994-5880461 Capsella rubella
Carub.0005s0989 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5870462-5880461 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510681 5273 Angiosperm View MSA
122366920 5261 Brassicaceae View MSA
123799265 5264 Brassicales-Malvales View MSA
124296806 5266 SBM View MSA
124148856 5268 Malvidae View MSA
123874772 5270 Rosid View MSA
123458698 5271 Pentapetalae View MSA
122494098 5272 Eudicot View MSA
120783766 5274 Embryophyte View MSA
122825740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain