Gene : Carub.0005s1057 C. rubella v1.1
Defline:  (1 of 21) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1057
Name:  ? Carub.0005s1057 Secondary Identifier:  ? PAC:39226706
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1057 0.5kb upstream 0.5kb upstream 4101 true scaffold_5: 6332212-6336312 Capsella rubella
Carub.0005s1057 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6335813-6336312 Capsella rubella
Carub.0005s1057 0.5kb downstream 0.5kb downstream 4101 true scaffold_5: 6331712-6335812 Capsella rubella
Carub.0005s1057 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6331712-6332211 Capsella rubella
Carub.0005s1057 1.0kb upstream 1.0kb upstream 4601 true scaffold_5: 6332212-6336812 Capsella rubella
Carub.0005s1057 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6335813-6336812 Capsella rubella
Carub.0005s1057 1.0kb downstream 1.0kb downstream 4601 true scaffold_5: 6331212-6335812 Capsella rubella
Carub.0005s1057 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6331212-6332211 Capsella rubella
Carub.0005s1057 2.0kb upstream 2.0kb upstream 5601 true scaffold_5: 6332212-6337812 Capsella rubella
Carub.0005s1057 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6335813-6337812 Capsella rubella
Carub.0005s1057 2.0kb downstream 2.0kb downstream 5601 true scaffold_5: 6330212-6335812 Capsella rubella
Carub.0005s1057 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6330212-6332211 Capsella rubella
Carub.0005s1057 5.0kb upstream 5.0kb upstream 8601 true scaffold_5: 6332212-6340812 Capsella rubella
Carub.0005s1057 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6335813-6340812 Capsella rubella
Carub.0005s1057 5.0kb downstream 5.0kb downstream 8601 true scaffold_5: 6327212-6335812 Capsella rubella
Carub.0005s1057 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6327212-6332211 Capsella rubella
Carub.0005s1057 10.0kb upstream 10.0kb upstream 13601 true scaffold_5: 6332212-6345812 Capsella rubella
Carub.0005s1057 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6335813-6345812 Capsella rubella
Carub.0005s1057 10.0kb downstream 10.0kb downstream 13601 true scaffold_5: 6322212-6335812 Capsella rubella
Carub.0005s1057 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6322212-6332211 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364601 5261 Brassicaceae View MSA
123835513 5264 Brassicales-Malvales View MSA
124337531 5266 SBM View MSA
124244442 5268 Malvidae View MSA
124061696 5270 Rosid View MSA
123736594 5271 Pentapetalae View MSA
122785807 5272 Eudicot View MSA
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain