Gene : Carub.0005s0841 C. rubella v1.1
Defline:  (1 of 4) PTHR18952//PTHR18952:SF118 - CARBONIC ANHYDRASE // ALPHA CARBONIC ANHYDRASE 6 Genomic Order:  841
Name:  ? Carub.0005s0841 Secondary Identifier:  ? PAC:39223798
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYANCAT-PWY Capsella rubella pathologic  
Crubella PWY-241 Capsella rubella pathologic  
Crubella PWY-7115 Capsella rubella pathologic  
Crubella PWY-7117 Capsella rubella pathologic  
Crubella PWYQT-4429 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0841 0.5kb upstream 0.5kb upstream 1778 true scaffold_5: 3999154-4000931 Capsella rubella
Carub.0005s0841 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3999154-3999653 Capsella rubella
Carub.0005s0841 0.5kb downstream 0.5kb downstream 1778 true scaffold_5: 3999654-4001431 Capsella rubella
Carub.0005s0841 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4000932-4001431 Capsella rubella
Carub.0005s0841 1.0kb upstream 1.0kb upstream 2278 true scaffold_5: 3998654-4000931 Capsella rubella
Carub.0005s0841 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3998654-3999653 Capsella rubella
Carub.0005s0841 1.0kb downstream 1.0kb downstream 2278 true scaffold_5: 3999654-4001931 Capsella rubella
Carub.0005s0841 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4000932-4001931 Capsella rubella
Carub.0005s0841 2.0kb upstream 2.0kb upstream 3278 true scaffold_5: 3997654-4000931 Capsella rubella
Carub.0005s0841 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3997654-3999653 Capsella rubella
Carub.0005s0841 2.0kb downstream 2.0kb downstream 3278 true scaffold_5: 3999654-4002931 Capsella rubella
Carub.0005s0841 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4000932-4002931 Capsella rubella
Carub.0005s0841 5.0kb upstream 5.0kb upstream 6278 true scaffold_5: 3994654-4000931 Capsella rubella
Carub.0005s0841 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3994654-3999653 Capsella rubella
Carub.0005s0841 5.0kb downstream 5.0kb downstream 6278 true scaffold_5: 3999654-4005931 Capsella rubella
Carub.0005s0841 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4000932-4005931 Capsella rubella
Carub.0005s0841 10.0kb upstream 10.0kb upstream 11278 true scaffold_5: 3989654-4000931 Capsella rubella
Carub.0005s0841 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3989654-3999653 Capsella rubella
Carub.0005s0841 10.0kb downstream 10.0kb downstream 11278 true scaffold_5: 3999654-4010931 Capsella rubella
Carub.0005s0841 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4000932-4010931 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367124 5261 Brassicaceae View MSA
123829371 5264 Brassicales-Malvales View MSA
124339890 5266 SBM View MSA
124254453 5268 Malvidae View MSA
124067085 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain