Gene : Carub.0005s0838 C. rubella v1.1
Defline:  (1 of 1) PTHR33417//PTHR33417:SF1 - FAMILY NOT NAMED // B12D PROTEIN Genomic Order:  838
Name:  ? Carub.0005s0838 Secondary Identifier:  ? PAC:39226525
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0838 0.5kb upstream 0.5kb upstream 1609 true scaffold_5: 3950224-3951832 Capsella rubella
Carub.0005s0838 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3950224-3950723 Capsella rubella
Carub.0005s0838 0.5kb downstream 0.5kb downstream 1609 true scaffold_5: 3950724-3952332 Capsella rubella
Carub.0005s0838 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3951833-3952332 Capsella rubella
Carub.0005s0838 1.0kb upstream 1.0kb upstream 2109 true scaffold_5: 3949724-3951832 Capsella rubella
Carub.0005s0838 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3949724-3950723 Capsella rubella
Carub.0005s0838 1.0kb downstream 1.0kb downstream 2109 true scaffold_5: 3950724-3952832 Capsella rubella
Carub.0005s0838 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3951833-3952832 Capsella rubella
Carub.0005s0838 2.0kb upstream 2.0kb upstream 3109 true scaffold_5: 3948724-3951832 Capsella rubella
Carub.0005s0838 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3948724-3950723 Capsella rubella
Carub.0005s0838 2.0kb downstream 2.0kb downstream 3109 true scaffold_5: 3950724-3953832 Capsella rubella
Carub.0005s0838 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3951833-3953832 Capsella rubella
Carub.0005s0838 5.0kb upstream 5.0kb upstream 6109 true scaffold_5: 3945724-3951832 Capsella rubella
Carub.0005s0838 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3945724-3950723 Capsella rubella
Carub.0005s0838 5.0kb downstream 5.0kb downstream 6109 true scaffold_5: 3950724-3956832 Capsella rubella
Carub.0005s0838 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3951833-3956832 Capsella rubella
Carub.0005s0838 10.0kb upstream 10.0kb upstream 11109 true scaffold_5: 3940724-3951832 Capsella rubella
Carub.0005s0838 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3940724-3950723 Capsella rubella
Carub.0005s0838 10.0kb downstream 10.0kb downstream 11109 true scaffold_5: 3950724-3961832 Capsella rubella
Carub.0005s0838 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3951833-3961832 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371386 5261 Brassicaceae View MSA
123827794 5264 Brassicales-Malvales View MSA
124341153 5266 SBM View MSA
124239508 5268 Malvidae View MSA
124062890 5270 Rosid View MSA
123738615 5271 Pentapetalae View MSA
122769927 5272 Eudicot View MSA
122048114 5273 Angiosperm View MSA
121310851 5274 Embryophyte View MSA
123348236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain