Gene : Carub.0005s0881 C. rubella v1.1
Defline:  (1 of 3) PTHR10799:SF660 - SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 1-RELATED Genomic Order:  881
Name:  ? Carub.0005s0881 Secondary Identifier:  ? PAC:39225040
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0881 0.5kb upstream 0.5kb upstream 3621 true scaffold_5: 5011203-5014823 Capsella rubella
Carub.0005s0881 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5014324-5014823 Capsella rubella
Carub.0005s0881 0.5kb downstream 0.5kb downstream 3621 true scaffold_5: 5010703-5014323 Capsella rubella
Carub.0005s0881 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5010703-5011202 Capsella rubella
Carub.0005s0881 1.0kb upstream 1.0kb upstream 4121 true scaffold_5: 5011203-5015323 Capsella rubella
Carub.0005s0881 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5014324-5015323 Capsella rubella
Carub.0005s0881 1.0kb downstream 1.0kb downstream 4121 true scaffold_5: 5010203-5014323 Capsella rubella
Carub.0005s0881 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5010203-5011202 Capsella rubella
Carub.0005s0881 2.0kb upstream 2.0kb upstream 5121 true scaffold_5: 5011203-5016323 Capsella rubella
Carub.0005s0881 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5014324-5016323 Capsella rubella
Carub.0005s0881 2.0kb downstream 2.0kb downstream 5121 true scaffold_5: 5009203-5014323 Capsella rubella
Carub.0005s0881 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5009203-5011202 Capsella rubella
Carub.0005s0881 5.0kb upstream 5.0kb upstream 8121 true scaffold_5: 5011203-5019323 Capsella rubella
Carub.0005s0881 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5014324-5019323 Capsella rubella
Carub.0005s0881 5.0kb downstream 5.0kb downstream 8121 true scaffold_5: 5006203-5014323 Capsella rubella
Carub.0005s0881 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5006203-5011202 Capsella rubella
Carub.0005s0881 10.0kb upstream 10.0kb upstream 13121 true scaffold_5: 5011203-5024323 Capsella rubella
Carub.0005s0881 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5014324-5024323 Capsella rubella
Carub.0005s0881 10.0kb downstream 10.0kb downstream 13121 true scaffold_5: 5001203-5014323 Capsella rubella
Carub.0005s0881 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5001203-5011202 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121497151 5273 Angiosperm Singleton cluster - no MSA
122334731 5261 Brassicaceae Singleton cluster - no MSA
123775541 5264 Brassicales-Malvales Singleton cluster - no MSA
124273948 5266 SBM Singleton cluster - no MSA
124129480 5268 Malvidae Singleton cluster - no MSA
123858018 5270 Rosid Singleton cluster - no MSA
123443760 5271 Pentapetalae Singleton cluster - no MSA
122479325 5272 Eudicot Singleton cluster - no MSA
120770512 5274 Embryophyte Singleton cluster - no MSA
122812879 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain