Gene : Carub.0005s0927 C. rubella v1.1
Defline:  (1 of 2) PTHR12668//PTHR12668:SF5 - TRANSMEMBRANE PROTEIN 14, 15 // UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  927
Name:  ? Carub.0005s0927 Secondary Identifier:  ? PAC:39224636
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0927 0.5kb upstream 0.5kb upstream 2197 true scaffold_5: 5491809-5494005 Capsella rubella
Carub.0005s0927 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5491809-5492308 Capsella rubella
Carub.0005s0927 0.5kb downstream 0.5kb downstream 2197 true scaffold_5: 5492309-5494505 Capsella rubella
Carub.0005s0927 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5494006-5494505 Capsella rubella
Carub.0005s0927 1.0kb upstream 1.0kb upstream 2697 true scaffold_5: 5491309-5494005 Capsella rubella
Carub.0005s0927 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5491309-5492308 Capsella rubella
Carub.0005s0927 1.0kb downstream 1.0kb downstream 2697 true scaffold_5: 5492309-5495005 Capsella rubella
Carub.0005s0927 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5494006-5495005 Capsella rubella
Carub.0005s0927 2.0kb upstream 2.0kb upstream 3697 true scaffold_5: 5490309-5494005 Capsella rubella
Carub.0005s0927 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5490309-5492308 Capsella rubella
Carub.0005s0927 2.0kb downstream 2.0kb downstream 3697 true scaffold_5: 5492309-5496005 Capsella rubella
Carub.0005s0927 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5494006-5496005 Capsella rubella
Carub.0005s0927 5.0kb upstream 5.0kb upstream 6697 true scaffold_5: 5487309-5494005 Capsella rubella
Carub.0005s0927 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5487309-5492308 Capsella rubella
Carub.0005s0927 5.0kb downstream 5.0kb downstream 6697 true scaffold_5: 5492309-5499005 Capsella rubella
Carub.0005s0927 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5494006-5499005 Capsella rubella
Carub.0005s0927 10.0kb upstream 10.0kb upstream 11697 true scaffold_5: 5482309-5494005 Capsella rubella
Carub.0005s0927 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5482309-5492308 Capsella rubella
Carub.0005s0927 10.0kb downstream 10.0kb downstream 11697 true scaffold_5: 5492309-5504005 Capsella rubella
Carub.0005s0927 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5494006-5504005 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366695 5261 Brassicaceae View MSA
123839267 5264 Brassicales-Malvales View MSA
124343542 5266 SBM View MSA
124238887 5268 Malvidae View MSA
124067619 5270 Rosid View MSA
123736820 5271 Pentapetalae View MSA
122786957 5272 Eudicot View MSA
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain