Gene : Carub.0005s1278 C. rubella v1.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  1278
Name:  ? Carub.0005s1278 Secondary Identifier:  ? PAC:39224352
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1278 0.5kb upstream 0.5kb upstream 3668 true scaffold_5: 7281389-7285056 Capsella rubella
Carub.0005s1278 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7284557-7285056 Capsella rubella
Carub.0005s1278 0.5kb downstream 0.5kb downstream 3668 true scaffold_5: 7280889-7284556 Capsella rubella
Carub.0005s1278 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7280889-7281388 Capsella rubella
Carub.0005s1278 1.0kb upstream 1.0kb upstream 4168 true scaffold_5: 7281389-7285556 Capsella rubella
Carub.0005s1278 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7284557-7285556 Capsella rubella
Carub.0005s1278 1.0kb downstream 1.0kb downstream 4168 true scaffold_5: 7280389-7284556 Capsella rubella
Carub.0005s1278 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7280389-7281388 Capsella rubella
Carub.0005s1278 2.0kb upstream 2.0kb upstream 5168 true scaffold_5: 7281389-7286556 Capsella rubella
Carub.0005s1278 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7284557-7286556 Capsella rubella
Carub.0005s1278 2.0kb downstream 2.0kb downstream 5168 true scaffold_5: 7279389-7284556 Capsella rubella
Carub.0005s1278 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7279389-7281388 Capsella rubella
Carub.0005s1278 5.0kb upstream 5.0kb upstream 8168 true scaffold_5: 7281389-7289556 Capsella rubella
Carub.0005s1278 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7284557-7289556 Capsella rubella
Carub.0005s1278 5.0kb downstream 5.0kb downstream 8168 true scaffold_5: 7276389-7284556 Capsella rubella
Carub.0005s1278 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7276389-7281388 Capsella rubella
Carub.0005s1278 10.0kb upstream 10.0kb upstream 13168 true scaffold_5: 7281389-7294556 Capsella rubella
Carub.0005s1278 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7284557-7294556 Capsella rubella
Carub.0005s1278 10.0kb downstream 10.0kb downstream 13168 true scaffold_5: 7271389-7284556 Capsella rubella
Carub.0005s1278 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7271389-7281388 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
122365315 5261 Brassicaceae View MSA
123827412 5264 Brassicales-Malvales View MSA
124342810 5266 SBM View MSA
124240381 5268 Malvidae View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain