Gene : Carub.0005s1084 C. rubella v1.1
Defline:  (1 of 4) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED Genomic Order:  1084
Name:  ? Carub.0005s1084 Secondary Identifier:  ? PAC:39225805
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1084 0.5kb upstream 0.5kb upstream 2138 true scaffold_5: 6459671-6461808 Capsella rubella
Carub.0005s1084 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6461309-6461808 Capsella rubella
Carub.0005s1084 0.5kb downstream 0.5kb downstream 2138 true scaffold_5: 6459171-6461308 Capsella rubella
Carub.0005s1084 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6459171-6459670 Capsella rubella
Carub.0005s1084 1.0kb upstream 1.0kb upstream 2638 true scaffold_5: 6459671-6462308 Capsella rubella
Carub.0005s1084 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6461309-6462308 Capsella rubella
Carub.0005s1084 1.0kb downstream 1.0kb downstream 2638 true scaffold_5: 6458671-6461308 Capsella rubella
Carub.0005s1084 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6458671-6459670 Capsella rubella
Carub.0005s1084 2.0kb upstream 2.0kb upstream 3638 true scaffold_5: 6459671-6463308 Capsella rubella
Carub.0005s1084 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6461309-6463308 Capsella rubella
Carub.0005s1084 2.0kb downstream 2.0kb downstream 3638 true scaffold_5: 6457671-6461308 Capsella rubella
Carub.0005s1084 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6457671-6459670 Capsella rubella
Carub.0005s1084 5.0kb upstream 5.0kb upstream 6638 true scaffold_5: 6459671-6466308 Capsella rubella
Carub.0005s1084 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6461309-6466308 Capsella rubella
Carub.0005s1084 5.0kb downstream 5.0kb downstream 6638 true scaffold_5: 6454671-6461308 Capsella rubella
Carub.0005s1084 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6454671-6459670 Capsella rubella
Carub.0005s1084 10.0kb upstream 10.0kb upstream 11638 true scaffold_5: 6459671-6471308 Capsella rubella
Carub.0005s1084 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6461309-6471308 Capsella rubella
Carub.0005s1084 10.0kb downstream 10.0kb downstream 11638 true scaffold_5: 6449671-6461308 Capsella rubella
Carub.0005s1084 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6449671-6459670 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362745 5261 Brassicaceae View MSA
123839369 5264 Brassicales-Malvales View MSA
124350411 5266 SBM View MSA
124244779 5268 Malvidae View MSA
124041597 5270 Rosid View MSA
123747168 5271 Pentapetalae View MSA
122786429 5272 Eudicot View MSA
122041882 5273 Angiosperm View MSA
121350710 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain