Gene : Carub.0005s1116 C. rubella v1.1

Defline:  (1 of 1) PTHR31942:SF12 - MLO-LIKE PROTEIN 3 Genomic Order:  1116
Name:  ? Carub.0005s1116 Secondary Identifier:  ? PAC:39224423

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1116 0.5kb upstream 0.5kb upstream 5088 true scaffold_5: 6612416-6617503 Capsella rubella
Carub.0005s1116 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6612416-6612915 Capsella rubella
Carub.0005s1116 0.5kb downstream 0.5kb downstream 5088 true scaffold_5: 6612916-6618003 Capsella rubella
Carub.0005s1116 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6617504-6618003 Capsella rubella
Carub.0005s1116 1.0kb upstream 1.0kb upstream 5588 true scaffold_5: 6611916-6617503 Capsella rubella
Carub.0005s1116 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6611916-6612915 Capsella rubella
Carub.0005s1116 1.0kb downstream 1.0kb downstream 5588 true scaffold_5: 6612916-6618503 Capsella rubella
Carub.0005s1116 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6617504-6618503 Capsella rubella
Carub.0005s1116 2.0kb upstream 2.0kb upstream 6588 true scaffold_5: 6610916-6617503 Capsella rubella
Carub.0005s1116 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6610916-6612915 Capsella rubella
Carub.0005s1116 2.0kb downstream 2.0kb downstream 6588 true scaffold_5: 6612916-6619503 Capsella rubella
Carub.0005s1116 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6617504-6619503 Capsella rubella
Carub.0005s1116 5.0kb upstream 5.0kb upstream 9588 true scaffold_5: 6607916-6617503 Capsella rubella
Carub.0005s1116 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6607916-6612915 Capsella rubella
Carub.0005s1116 5.0kb downstream 5.0kb downstream 9588 true scaffold_5: 6612916-6622503 Capsella rubella
Carub.0005s1116 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6617504-6622503 Capsella rubella
Carub.0005s1116 10.0kb upstream 10.0kb upstream 14588 true scaffold_5: 6602916-6617503 Capsella rubella
Carub.0005s1116 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6602916-6612915 Capsella rubella
Carub.0005s1116 10.0kb downstream 10.0kb downstream 14588 true scaffold_5: 6612916-6627503 Capsella rubella
Carub.0005s1116 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6617504-6627503 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377782 5261 Brassicaceae View MSA
123832299 5264 Brassicales-Malvales View MSA
124346031 5266 SBM View MSA
124240762 5268 Malvidae View MSA
124072355 5270 Rosid View MSA
123737191 5271 Pentapetalae View MSA
122795625 5272 Eudicot View MSA
122050074 5273 Angiosperm View MSA
121311724 5274 Embryophyte View MSA
123348984 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain