Gene : Carub.0005s1175 C. rubella v1.1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF8 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Genomic Order:  1175
Name:  ? Carub.0005s1175 Secondary Identifier:  ? PAC:39224997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1175 0.5kb upstream 0.5kb upstream 2201 true scaffold_5: 6861016-6863216 Capsella rubella
Carub.0005s1175 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6862717-6863216 Capsella rubella
Carub.0005s1175 0.5kb downstream 0.5kb downstream 2201 true scaffold_5: 6860516-6862716 Capsella rubella
Carub.0005s1175 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6860516-6861015 Capsella rubella
Carub.0005s1175 1.0kb upstream 1.0kb upstream 2701 true scaffold_5: 6861016-6863716 Capsella rubella
Carub.0005s1175 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6862717-6863716 Capsella rubella
Carub.0005s1175 1.0kb downstream 1.0kb downstream 2701 true scaffold_5: 6860016-6862716 Capsella rubella
Carub.0005s1175 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6860016-6861015 Capsella rubella
Carub.0005s1175 2.0kb upstream 2.0kb upstream 3701 true scaffold_5: 6861016-6864716 Capsella rubella
Carub.0005s1175 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6862717-6864716 Capsella rubella
Carub.0005s1175 2.0kb downstream 2.0kb downstream 3701 true scaffold_5: 6859016-6862716 Capsella rubella
Carub.0005s1175 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6859016-6861015 Capsella rubella
Carub.0005s1175 5.0kb upstream 5.0kb upstream 6701 true scaffold_5: 6861016-6867716 Capsella rubella
Carub.0005s1175 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6862717-6867716 Capsella rubella
Carub.0005s1175 5.0kb downstream 5.0kb downstream 6701 true scaffold_5: 6856016-6862716 Capsella rubella
Carub.0005s1175 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6856016-6861015 Capsella rubella
Carub.0005s1175 10.0kb upstream 10.0kb upstream 11701 true scaffold_5: 6861016-6872716 Capsella rubella
Carub.0005s1175 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6862717-6872716 Capsella rubella
Carub.0005s1175 10.0kb downstream 10.0kb downstream 11701 true scaffold_5: 6851016-6862716 Capsella rubella
Carub.0005s1175 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6851016-6861015 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049496 5273 Angiosperm View MSA
122363009 5261 Brassicaceae View MSA
123828191 5264 Brassicales-Malvales View MSA
124338636 5266 SBM View MSA
124241230 5268 Malvidae View MSA
124066774 5270 Rosid View MSA
123739600 5271 Pentapetalae View MSA
122788271 5272 Eudicot View MSA
121311438 5274 Embryophyte View MSA
123348734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain