Gene : Carub.0005s1475 C. rubella v1.1
Defline:  (1 of 1) K01652 - acetolactate synthase I/II/III large subunit (E2.2.1.6L, ilvB, ilvG, ilvI) Genomic Order:  1475
Name:  ? Carub.0005s1475 Secondary Identifier:  ? PAC:39224913
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella BRANCHED-CHAIN-AA-SYN-PWY Capsella rubella pathologic  
Crubella ILEUSYN-PWY Capsella rubella pathologic  
Crubella PWY-3001 Capsella rubella pathologic  
Crubella VALSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1475 0.5kb upstream 0.5kb upstream 2504 true scaffold_5: 8045638-8048141 Capsella rubella
Carub.0005s1475 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8047642-8048141 Capsella rubella
Carub.0005s1475 0.5kb downstream 0.5kb downstream 2504 true scaffold_5: 8045138-8047641 Capsella rubella
Carub.0005s1475 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8045138-8045637 Capsella rubella
Carub.0005s1475 1.0kb upstream 1.0kb upstream 3004 true scaffold_5: 8045638-8048641 Capsella rubella
Carub.0005s1475 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8047642-8048641 Capsella rubella
Carub.0005s1475 1.0kb downstream 1.0kb downstream 3004 true scaffold_5: 8044638-8047641 Capsella rubella
Carub.0005s1475 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8044638-8045637 Capsella rubella
Carub.0005s1475 2.0kb upstream 2.0kb upstream 4004 true scaffold_5: 8045638-8049641 Capsella rubella
Carub.0005s1475 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8047642-8049641 Capsella rubella
Carub.0005s1475 2.0kb downstream 2.0kb downstream 4004 true scaffold_5: 8043638-8047641 Capsella rubella
Carub.0005s1475 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8043638-8045637 Capsella rubella
Carub.0005s1475 5.0kb upstream 5.0kb upstream 7004 true scaffold_5: 8045638-8052641 Capsella rubella
Carub.0005s1475 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8047642-8052641 Capsella rubella
Carub.0005s1475 5.0kb downstream 5.0kb downstream 7004 true scaffold_5: 8040638-8047641 Capsella rubella
Carub.0005s1475 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8040638-8045637 Capsella rubella
Carub.0005s1475 10.0kb upstream 10.0kb upstream 12004 true scaffold_5: 8045638-8057641 Capsella rubella
Carub.0005s1475 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8047642-8057641 Capsella rubella
Carub.0005s1475 10.0kb downstream 10.0kb downstream 12004 true scaffold_5: 8035638-8047641 Capsella rubella
Carub.0005s1475 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8035638-8045637 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372690 5261 Brassicaceae View MSA
123838069 5264 Brassicales-Malvales View MSA
124338702 5266 SBM View MSA
124237880 5268 Malvidae View MSA
124061754 5270 Rosid View MSA
123740157 5271 Pentapetalae View MSA
122787294 5272 Eudicot View MSA
122042643 5273 Angiosperm View MSA
121346996 5274 Embryophyte View MSA
123424213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain