Gene : Carub.0005s1560 C. rubella v1.1
Defline:  (1 of 182) PTHR31790//PTHR31790:SF10 - FAMILY NOT NAMED // F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  1560
Name:  ? Carub.0005s1560 Secondary Identifier:  ? PAC:39224970
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1560 0.5kb upstream 0.5kb upstream 1697 true scaffold_5: 8337588-8339284 Capsella rubella
Carub.0005s1560 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8337588-8338087 Capsella rubella
Carub.0005s1560 0.5kb downstream 0.5kb downstream 1697 true scaffold_5: 8338088-8339784 Capsella rubella
Carub.0005s1560 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8339285-8339784 Capsella rubella
Carub.0005s1560 1.0kb upstream 1.0kb upstream 2197 true scaffold_5: 8337088-8339284 Capsella rubella
Carub.0005s1560 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8337088-8338087 Capsella rubella
Carub.0005s1560 1.0kb downstream 1.0kb downstream 2197 true scaffold_5: 8338088-8340284 Capsella rubella
Carub.0005s1560 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8339285-8340284 Capsella rubella
Carub.0005s1560 2.0kb upstream 2.0kb upstream 3197 true scaffold_5: 8336088-8339284 Capsella rubella
Carub.0005s1560 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8336088-8338087 Capsella rubella
Carub.0005s1560 2.0kb downstream 2.0kb downstream 3197 true scaffold_5: 8338088-8341284 Capsella rubella
Carub.0005s1560 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8339285-8341284 Capsella rubella
Carub.0005s1560 5.0kb upstream 5.0kb upstream 6197 true scaffold_5: 8333088-8339284 Capsella rubella
Carub.0005s1560 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8333088-8338087 Capsella rubella
Carub.0005s1560 5.0kb downstream 5.0kb downstream 6197 true scaffold_5: 8338088-8344284 Capsella rubella
Carub.0005s1560 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8339285-8344284 Capsella rubella
Carub.0005s1560 10.0kb upstream 10.0kb upstream 11197 true scaffold_5: 8328088-8339284 Capsella rubella
Carub.0005s1560 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8328088-8338087 Capsella rubella
Carub.0005s1560 10.0kb downstream 10.0kb downstream 11197 true scaffold_5: 8338088-8349284 Capsella rubella
Carub.0005s1560 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8339285-8349284 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381713 5261 Brassicaceae View MSA
123803391 5264 Brassicales-Malvales View MSA
124300504 5266 SBM View MSA
124252683 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain