Gene : Carub.0005s1364 C. rubella v1.1
Defline:  (1 of 19) 3.2.1.14 - Chitinase / Poly-beta-glucosaminidase Genomic Order:  1364
Name:  ? Carub.0005s1364 Secondary Identifier:  ? PAC:39224365
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6902 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1364 0.5kb upstream 0.5kb upstream 1453 true scaffold_5: 7575200-7576652 Capsella rubella
Carub.0005s1364 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7575200-7575699 Capsella rubella
Carub.0005s1364 0.5kb downstream 0.5kb downstream 1453 true scaffold_5: 7575700-7577152 Capsella rubella
Carub.0005s1364 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7576653-7577152 Capsella rubella
Carub.0005s1364 1.0kb upstream 1.0kb upstream 1953 true scaffold_5: 7574700-7576652 Capsella rubella
Carub.0005s1364 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7574700-7575699 Capsella rubella
Carub.0005s1364 1.0kb downstream 1.0kb downstream 1953 true scaffold_5: 7575700-7577652 Capsella rubella
Carub.0005s1364 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7576653-7577652 Capsella rubella
Carub.0005s1364 2.0kb upstream 2.0kb upstream 2953 true scaffold_5: 7573700-7576652 Capsella rubella
Carub.0005s1364 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7573700-7575699 Capsella rubella
Carub.0005s1364 2.0kb downstream 2.0kb downstream 2953 true scaffold_5: 7575700-7578652 Capsella rubella
Carub.0005s1364 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7576653-7578652 Capsella rubella
Carub.0005s1364 5.0kb upstream 5.0kb upstream 5953 true scaffold_5: 7570700-7576652 Capsella rubella
Carub.0005s1364 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7570700-7575699 Capsella rubella
Carub.0005s1364 5.0kb downstream 5.0kb downstream 5953 true scaffold_5: 7575700-7581652 Capsella rubella
Carub.0005s1364 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7576653-7581652 Capsella rubella
Carub.0005s1364 10.0kb upstream 10.0kb upstream 10953 true scaffold_5: 7565700-7576652 Capsella rubella
Carub.0005s1364 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7565700-7575699 Capsella rubella
Carub.0005s1364 10.0kb downstream 10.0kb downstream 10953 true scaffold_5: 7575700-7586652 Capsella rubella
Carub.0005s1364 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7576653-7586652 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041402 5273 Angiosperm View MSA
122382229 5261 Brassicaceae View MSA
123803761 5264 Brassicales-Malvales View MSA
124352051 5266 SBM View MSA
124252147 5268 Malvidae View MSA
124072738 5270 Rosid View MSA
123744755 5271 Pentapetalae View MSA
122789729 5272 Eudicot View MSA
121351498 5274 Embryophyte View MSA
123382192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain