Gene : Carub.0005s1377 C. rubella v1.1
Defline:  (1 of 1) PTHR23042//PTHR23042:SF51 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR BHLH47 Genomic Order:  1377
Name:  ? Carub.0005s1377 Secondary Identifier:  ? PAC:39224056
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1377 0.5kb upstream 0.5kb upstream 2366 true scaffold_5: 7629792-7632157 Capsella rubella
Carub.0005s1377 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7629792-7630291 Capsella rubella
Carub.0005s1377 0.5kb downstream 0.5kb downstream 2366 true scaffold_5: 7630292-7632657 Capsella rubella
Carub.0005s1377 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7632158-7632657 Capsella rubella
Carub.0005s1377 1.0kb upstream 1.0kb upstream 2866 true scaffold_5: 7629292-7632157 Capsella rubella
Carub.0005s1377 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7629292-7630291 Capsella rubella
Carub.0005s1377 1.0kb downstream 1.0kb downstream 2866 true scaffold_5: 7630292-7633157 Capsella rubella
Carub.0005s1377 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7632158-7633157 Capsella rubella
Carub.0005s1377 2.0kb upstream 2.0kb upstream 3866 true scaffold_5: 7628292-7632157 Capsella rubella
Carub.0005s1377 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7628292-7630291 Capsella rubella
Carub.0005s1377 2.0kb downstream 2.0kb downstream 3866 true scaffold_5: 7630292-7634157 Capsella rubella
Carub.0005s1377 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7632158-7634157 Capsella rubella
Carub.0005s1377 5.0kb upstream 5.0kb upstream 6866 true scaffold_5: 7625292-7632157 Capsella rubella
Carub.0005s1377 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7625292-7630291 Capsella rubella
Carub.0005s1377 5.0kb downstream 5.0kb downstream 6866 true scaffold_5: 7630292-7637157 Capsella rubella
Carub.0005s1377 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7632158-7637157 Capsella rubella
Carub.0005s1377 10.0kb upstream 10.0kb upstream 11866 true scaffold_5: 7620292-7632157 Capsella rubella
Carub.0005s1377 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7620292-7630291 Capsella rubella
Carub.0005s1377 10.0kb downstream 10.0kb downstream 11866 true scaffold_5: 7630292-7642157 Capsella rubella
Carub.0005s1377 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7632158-7642157 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378387 5261 Brassicaceae View MSA
123831438 5264 Brassicales-Malvales View MSA
124338458 5266 SBM View MSA
124236941 5268 Malvidae View MSA
124071212 5270 Rosid View MSA
123743361 5271 Pentapetalae View MSA
122787264 5272 Eudicot View MSA
122043647 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain