Gene : Carub.0005s1392 C. rubella v1.1
Defline:  (1 of 1) K18467 - vacuolar protein sorting-associated protein 29 (VPS29) Genomic Order:  1392
Name:  ? Carub.0005s1392 Secondary Identifier:  ? PAC:39225694
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1392 0.5kb upstream 0.5kb upstream 2867 true scaffold_5: 7691598-7694464 Capsella rubella
Carub.0005s1392 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7693965-7694464 Capsella rubella
Carub.0005s1392 0.5kb downstream 0.5kb downstream 2867 true scaffold_5: 7691098-7693964 Capsella rubella
Carub.0005s1392 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7691098-7691597 Capsella rubella
Carub.0005s1392 1.0kb upstream 1.0kb upstream 3367 true scaffold_5: 7691598-7694964 Capsella rubella
Carub.0005s1392 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7693965-7694964 Capsella rubella
Carub.0005s1392 1.0kb downstream 1.0kb downstream 3367 true scaffold_5: 7690598-7693964 Capsella rubella
Carub.0005s1392 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7690598-7691597 Capsella rubella
Carub.0005s1392 2.0kb upstream 2.0kb upstream 4367 true scaffold_5: 7691598-7695964 Capsella rubella
Carub.0005s1392 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7693965-7695964 Capsella rubella
Carub.0005s1392 2.0kb downstream 2.0kb downstream 4367 true scaffold_5: 7689598-7693964 Capsella rubella
Carub.0005s1392 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7689598-7691597 Capsella rubella
Carub.0005s1392 5.0kb upstream 5.0kb upstream 7367 true scaffold_5: 7691598-7698964 Capsella rubella
Carub.0005s1392 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7693965-7698964 Capsella rubella
Carub.0005s1392 5.0kb downstream 5.0kb downstream 7367 true scaffold_5: 7686598-7693964 Capsella rubella
Carub.0005s1392 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7686598-7691597 Capsella rubella
Carub.0005s1392 10.0kb upstream 10.0kb upstream 12367 true scaffold_5: 7691598-7703964 Capsella rubella
Carub.0005s1392 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7693965-7703964 Capsella rubella
Carub.0005s1392 10.0kb downstream 10.0kb downstream 12367 true scaffold_5: 7681598-7693964 Capsella rubella
Carub.0005s1392 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7681598-7691597 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361488 5261 Brassicaceae View MSA
123835756 5264 Brassicales-Malvales View MSA
124348903 5266 SBM View MSA
124250664 5268 Malvidae View MSA
124071774 5270 Rosid View MSA
123736460 5271 Pentapetalae View MSA
122787236 5272 Eudicot View MSA
122043646 5273 Angiosperm View MSA
121346806 5274 Embryophyte View MSA
123424212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain