Gene : Carub.0005s1391 C. rubella v1.1
Defline:  (1 of 1) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  1391
Name:  ? Carub.0005s1391 Secondary Identifier:  ? PAC:39224622
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY66-422 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1391 0.5kb upstream 0.5kb upstream 3401 true scaffold_5: 7687947-7691347 Capsella rubella
Carub.0005s1391 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7687947-7688446 Capsella rubella
Carub.0005s1391 0.5kb downstream 0.5kb downstream 3401 true scaffold_5: 7688447-7691847 Capsella rubella
Carub.0005s1391 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7691348-7691847 Capsella rubella
Carub.0005s1391 1.0kb upstream 1.0kb upstream 3901 true scaffold_5: 7687447-7691347 Capsella rubella
Carub.0005s1391 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7687447-7688446 Capsella rubella
Carub.0005s1391 1.0kb downstream 1.0kb downstream 3901 true scaffold_5: 7688447-7692347 Capsella rubella
Carub.0005s1391 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7691348-7692347 Capsella rubella
Carub.0005s1391 2.0kb upstream 2.0kb upstream 4901 true scaffold_5: 7686447-7691347 Capsella rubella
Carub.0005s1391 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7686447-7688446 Capsella rubella
Carub.0005s1391 2.0kb downstream 2.0kb downstream 4901 true scaffold_5: 7688447-7693347 Capsella rubella
Carub.0005s1391 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7691348-7693347 Capsella rubella
Carub.0005s1391 5.0kb upstream 5.0kb upstream 7901 true scaffold_5: 7683447-7691347 Capsella rubella
Carub.0005s1391 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7683447-7688446 Capsella rubella
Carub.0005s1391 5.0kb downstream 5.0kb downstream 7901 true scaffold_5: 7688447-7696347 Capsella rubella
Carub.0005s1391 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7691348-7696347 Capsella rubella
Carub.0005s1391 10.0kb upstream 10.0kb upstream 12901 true scaffold_5: 7678447-7691347 Capsella rubella
Carub.0005s1391 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7678447-7688446 Capsella rubella
Carub.0005s1391 10.0kb downstream 10.0kb downstream 12901 true scaffold_5: 7688447-7701347 Capsella rubella
Carub.0005s1391 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7691348-7701347 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365500 5261 Brassicaceae View MSA
123830104 5264 Brassicales-Malvales View MSA
124340129 5266 SBM View MSA
124241568 5268 Malvidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain