Gene : Carub.0005s1420 C. rubella v1.1

Defline:  (1 of 10) K14492 - two-component response regulator ARR-A family (ARR-A) Genomic Order:  1420
Name:  ? Carub.0005s1420 Secondary Identifier:  ? PAC:39224615

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1420 0.5kb upstream 0.5kb upstream 2254 true scaffold_5: 7807117-7809370 Capsella rubella
Carub.0005s1420 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7808871-7809370 Capsella rubella
Carub.0005s1420 0.5kb downstream 0.5kb downstream 2254 true scaffold_5: 7806617-7808870 Capsella rubella
Carub.0005s1420 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7806617-7807116 Capsella rubella
Carub.0005s1420 1.0kb upstream 1.0kb upstream 2754 true scaffold_5: 7807117-7809870 Capsella rubella
Carub.0005s1420 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7808871-7809870 Capsella rubella
Carub.0005s1420 1.0kb downstream 1.0kb downstream 2754 true scaffold_5: 7806117-7808870 Capsella rubella
Carub.0005s1420 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7806117-7807116 Capsella rubella
Carub.0005s1420 2.0kb upstream 2.0kb upstream 3754 true scaffold_5: 7807117-7810870 Capsella rubella
Carub.0005s1420 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7808871-7810870 Capsella rubella
Carub.0005s1420 2.0kb downstream 2.0kb downstream 3754 true scaffold_5: 7805117-7808870 Capsella rubella
Carub.0005s1420 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7805117-7807116 Capsella rubella
Carub.0005s1420 5.0kb upstream 5.0kb upstream 6754 true scaffold_5: 7807117-7813870 Capsella rubella
Carub.0005s1420 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7808871-7813870 Capsella rubella
Carub.0005s1420 5.0kb downstream 5.0kb downstream 6754 true scaffold_5: 7802117-7808870 Capsella rubella
Carub.0005s1420 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7802117-7807116 Capsella rubella
Carub.0005s1420 10.0kb upstream 10.0kb upstream 11754 true scaffold_5: 7807117-7818870 Capsella rubella
Carub.0005s1420 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7808871-7818870 Capsella rubella
Carub.0005s1420 10.0kb downstream 10.0kb downstream 11754 true scaffold_5: 7797117-7808870 Capsella rubella
Carub.0005s1420 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7797117-7807116 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360994 5261 Brassicaceae View MSA
123798082 5264 Brassicales-Malvales View MSA
124349643 5266 SBM View MSA
124251260 5268 Malvidae View MSA
124068460 5270 Rosid View MSA
123744932 5271 Pentapetalae View MSA
122791853 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain