Gene : Carub.0005s1416 C. rubella v1.1
Defline:  (1 of 2) PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Genomic Order:  1416
Name:  ? Carub.0005s1416 Secondary Identifier:  ? PAC:39226286
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1416 0.5kb upstream 0.5kb upstream 6416 true scaffold_5: 7784439-7790854 Capsella rubella
Carub.0005s1416 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7790355-7790854 Capsella rubella
Carub.0005s1416 0.5kb downstream 0.5kb downstream 6416 true scaffold_5: 7783939-7790354 Capsella rubella
Carub.0005s1416 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7783939-7784438 Capsella rubella
Carub.0005s1416 1.0kb upstream 1.0kb upstream 6916 true scaffold_5: 7784439-7791354 Capsella rubella
Carub.0005s1416 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7790355-7791354 Capsella rubella
Carub.0005s1416 1.0kb downstream 1.0kb downstream 6916 true scaffold_5: 7783439-7790354 Capsella rubella
Carub.0005s1416 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7783439-7784438 Capsella rubella
Carub.0005s1416 2.0kb upstream 2.0kb upstream 7916 true scaffold_5: 7784439-7792354 Capsella rubella
Carub.0005s1416 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7790355-7792354 Capsella rubella
Carub.0005s1416 2.0kb downstream 2.0kb downstream 7916 true scaffold_5: 7782439-7790354 Capsella rubella
Carub.0005s1416 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7782439-7784438 Capsella rubella
Carub.0005s1416 5.0kb upstream 5.0kb upstream 10916 true scaffold_5: 7784439-7795354 Capsella rubella
Carub.0005s1416 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7790355-7795354 Capsella rubella
Carub.0005s1416 5.0kb downstream 5.0kb downstream 10916 true scaffold_5: 7779439-7790354 Capsella rubella
Carub.0005s1416 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7779439-7784438 Capsella rubella
Carub.0005s1416 10.0kb upstream 10.0kb upstream 15916 true scaffold_5: 7784439-7800354 Capsella rubella
Carub.0005s1416 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7790355-7800354 Capsella rubella
Carub.0005s1416 10.0kb downstream 10.0kb downstream 15916 true scaffold_5: 7774439-7790354 Capsella rubella
Carub.0005s1416 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7774439-7784438 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375857 5261 Brassicaceae View MSA
123840447 5264 Brassicales-Malvales View MSA
124343778 5266 SBM View MSA
124250789 5268 Malvidae View MSA
124070029 5270 Rosid View MSA
123751253 5271 Pentapetalae View MSA
122792090 5272 Eudicot View MSA
122044388 5273 Angiosperm View MSA
121350650 5274 Embryophyte View MSA
123381837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain