Gene : Carub.0005s1732 C. rubella v1.1
Defline:  (1 of 3) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1732
Name:  ? Carub.0005s1732 Secondary Identifier:  ? PAC:39224435
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1732 0.5kb upstream 0.5kb upstream 2093 true scaffold_5: 9032120-9034212 Capsella rubella
Carub.0005s1732 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9032120-9032619 Capsella rubella
Carub.0005s1732 0.5kb downstream 0.5kb downstream 2093 true scaffold_5: 9032620-9034712 Capsella rubella
Carub.0005s1732 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9034213-9034712 Capsella rubella
Carub.0005s1732 1.0kb upstream 1.0kb upstream 2593 true scaffold_5: 9031620-9034212 Capsella rubella
Carub.0005s1732 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9031620-9032619 Capsella rubella
Carub.0005s1732 1.0kb downstream 1.0kb downstream 2593 true scaffold_5: 9032620-9035212 Capsella rubella
Carub.0005s1732 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9034213-9035212 Capsella rubella
Carub.0005s1732 2.0kb upstream 2.0kb upstream 3593 true scaffold_5: 9030620-9034212 Capsella rubella
Carub.0005s1732 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9030620-9032619 Capsella rubella
Carub.0005s1732 2.0kb downstream 2.0kb downstream 3593 true scaffold_5: 9032620-9036212 Capsella rubella
Carub.0005s1732 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9034213-9036212 Capsella rubella
Carub.0005s1732 5.0kb upstream 5.0kb upstream 6593 true scaffold_5: 9027620-9034212 Capsella rubella
Carub.0005s1732 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9027620-9032619 Capsella rubella
Carub.0005s1732 5.0kb downstream 5.0kb downstream 6593 true scaffold_5: 9032620-9039212 Capsella rubella
Carub.0005s1732 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9034213-9039212 Capsella rubella
Carub.0005s1732 10.0kb upstream 10.0kb upstream 11593 true scaffold_5: 9022620-9034212 Capsella rubella
Carub.0005s1732 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9022620-9032619 Capsella rubella
Carub.0005s1732 10.0kb downstream 10.0kb downstream 11593 true scaffold_5: 9032620-9044212 Capsella rubella
Carub.0005s1732 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9034213-9044212 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361918 5261 Brassicaceae View MSA
123840908 5264 Brassicales-Malvales View MSA
124350901 5266 SBM View MSA
124246593 5268 Malvidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain