Gene : Carub.0005s1734 C. rubella v1.1
Defline:  (1 of 3) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1734
Name:  ? Carub.0005s1734 Secondary Identifier:  ? PAC:39225573
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1734 0.5kb upstream 0.5kb upstream 2408 true scaffold_5: 9045003-9047410 Capsella rubella
Carub.0005s1734 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9045003-9045502 Capsella rubella
Carub.0005s1734 0.5kb downstream 0.5kb downstream 2408 true scaffold_5: 9045503-9047910 Capsella rubella
Carub.0005s1734 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9047411-9047910 Capsella rubella
Carub.0005s1734 1.0kb upstream 1.0kb upstream 2908 true scaffold_5: 9044503-9047410 Capsella rubella
Carub.0005s1734 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9044503-9045502 Capsella rubella
Carub.0005s1734 1.0kb downstream 1.0kb downstream 2908 true scaffold_5: 9045503-9048410 Capsella rubella
Carub.0005s1734 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9047411-9048410 Capsella rubella
Carub.0005s1734 2.0kb upstream 2.0kb upstream 3908 true scaffold_5: 9043503-9047410 Capsella rubella
Carub.0005s1734 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9043503-9045502 Capsella rubella
Carub.0005s1734 2.0kb downstream 2.0kb downstream 3908 true scaffold_5: 9045503-9049410 Capsella rubella
Carub.0005s1734 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9047411-9049410 Capsella rubella
Carub.0005s1734 5.0kb upstream 5.0kb upstream 6908 true scaffold_5: 9040503-9047410 Capsella rubella
Carub.0005s1734 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9040503-9045502 Capsella rubella
Carub.0005s1734 5.0kb downstream 5.0kb downstream 6908 true scaffold_5: 9045503-9052410 Capsella rubella
Carub.0005s1734 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9047411-9052410 Capsella rubella
Carub.0005s1734 10.0kb upstream 10.0kb upstream 11908 true scaffold_5: 9035503-9047410 Capsella rubella
Carub.0005s1734 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9035503-9045502 Capsella rubella
Carub.0005s1734 10.0kb downstream 10.0kb downstream 11908 true scaffold_5: 9045503-9057410 Capsella rubella
Carub.0005s1734 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9047411-9057410 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363071 5261 Brassicaceae View MSA
123798470 5264 Brassicales-Malvales View MSA
124296101 5266 SBM View MSA
124148353 5268 Malvidae View MSA
123874363 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain