Gene : Carub.0005s1769 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1769
Name:  ? Carub.0005s1769 Secondary Identifier:  ? PAC:39224198
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1769 0.5kb upstream 0.5kb upstream 2084 true scaffold_5: 9157972-9160055 Capsella rubella
Carub.0005s1769 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9159556-9160055 Capsella rubella
Carub.0005s1769 0.5kb downstream 0.5kb downstream 2084 true scaffold_5: 9157472-9159555 Capsella rubella
Carub.0005s1769 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9157472-9157971 Capsella rubella
Carub.0005s1769 1.0kb upstream 1.0kb upstream 2584 true scaffold_5: 9157972-9160555 Capsella rubella
Carub.0005s1769 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9159556-9160555 Capsella rubella
Carub.0005s1769 1.0kb downstream 1.0kb downstream 2584 true scaffold_5: 9156972-9159555 Capsella rubella
Carub.0005s1769 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9156972-9157971 Capsella rubella
Carub.0005s1769 2.0kb upstream 2.0kb upstream 3584 true scaffold_5: 9157972-9161555 Capsella rubella
Carub.0005s1769 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9159556-9161555 Capsella rubella
Carub.0005s1769 2.0kb downstream 2.0kb downstream 3584 true scaffold_5: 9155972-9159555 Capsella rubella
Carub.0005s1769 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9155972-9157971 Capsella rubella
Carub.0005s1769 5.0kb upstream 5.0kb upstream 6584 true scaffold_5: 9157972-9164555 Capsella rubella
Carub.0005s1769 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9159556-9164555 Capsella rubella
Carub.0005s1769 5.0kb downstream 5.0kb downstream 6584 true scaffold_5: 9152972-9159555 Capsella rubella
Carub.0005s1769 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9152972-9157971 Capsella rubella
Carub.0005s1769 10.0kb upstream 10.0kb upstream 11584 true scaffold_5: 9157972-9169555 Capsella rubella
Carub.0005s1769 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9159556-9169555 Capsella rubella
Carub.0005s1769 10.0kb downstream 10.0kb downstream 11584 true scaffold_5: 9147972-9159555 Capsella rubella
Carub.0005s1769 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9147972-9157971 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370330 5261 Brassicaceae View MSA
123835668 5264 Brassicales-Malvales View MSA
124339835 5266 SBM View MSA
124238427 5268 Malvidae View MSA
124051517 5270 Rosid View MSA
123741798 5271 Pentapetalae View MSA
122789514 5272 Eudicot View MSA
122049493 5273 Angiosperm View MSA
121311435 5274 Embryophyte View MSA
123348731 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain