Gene : Carub.0005s1791 C. rubella v1.1
Defline:  (1 of 79) PTHR32212//PTHR32212:SF126 - FAMILY NOT NAMED // EMB|CAB62440.1-RELATED Genomic Order:  1791
Name:  ? Carub.0005s1791 Secondary Identifier:  ? PAC:39224873
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1791 0.5kb upstream 0.5kb upstream 2386 true scaffold_5: 9220938-9223323 Capsella rubella
Carub.0005s1791 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9222824-9223323 Capsella rubella
Carub.0005s1791 0.5kb downstream 0.5kb downstream 2386 true scaffold_5: 9220438-9222823 Capsella rubella
Carub.0005s1791 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9220438-9220937 Capsella rubella
Carub.0005s1791 1.0kb upstream 1.0kb upstream 2886 true scaffold_5: 9220938-9223823 Capsella rubella
Carub.0005s1791 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9222824-9223823 Capsella rubella
Carub.0005s1791 1.0kb downstream 1.0kb downstream 2886 true scaffold_5: 9219938-9222823 Capsella rubella
Carub.0005s1791 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9219938-9220937 Capsella rubella
Carub.0005s1791 2.0kb upstream 2.0kb upstream 3886 true scaffold_5: 9220938-9224823 Capsella rubella
Carub.0005s1791 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9222824-9224823 Capsella rubella
Carub.0005s1791 2.0kb downstream 2.0kb downstream 3886 true scaffold_5: 9218938-9222823 Capsella rubella
Carub.0005s1791 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9218938-9220937 Capsella rubella
Carub.0005s1791 5.0kb upstream 5.0kb upstream 6886 true scaffold_5: 9220938-9227823 Capsella rubella
Carub.0005s1791 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9222824-9227823 Capsella rubella
Carub.0005s1791 5.0kb downstream 5.0kb downstream 6886 true scaffold_5: 9215938-9222823 Capsella rubella
Carub.0005s1791 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9215938-9220937 Capsella rubella
Carub.0005s1791 10.0kb upstream 10.0kb upstream 11886 true scaffold_5: 9220938-9232823 Capsella rubella
Carub.0005s1791 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9222824-9232823 Capsella rubella
Carub.0005s1791 10.0kb downstream 10.0kb downstream 11886 true scaffold_5: 9210938-9222823 Capsella rubella
Carub.0005s1791 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9210938-9220937 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379638 5261 Brassicaceae View MSA
123802361 5264 Brassicales-Malvales View MSA
124299560 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain