Gene : Carub.0005s1784 C. rubella v1.1
Defline:  (1 of 3) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  1784
Name:  ? Carub.0005s1784 Secondary Identifier:  ? PAC:39225373
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6368 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1784 0.5kb upstream 0.5kb upstream 5156 true scaffold_5: 9198154-9203309 Capsella rubella
Carub.0005s1784 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9198154-9198653 Capsella rubella
Carub.0005s1784 0.5kb downstream 0.5kb downstream 5156 true scaffold_5: 9198654-9203809 Capsella rubella
Carub.0005s1784 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9203310-9203809 Capsella rubella
Carub.0005s1784 1.0kb upstream 1.0kb upstream 5656 true scaffold_5: 9197654-9203309 Capsella rubella
Carub.0005s1784 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9197654-9198653 Capsella rubella
Carub.0005s1784 1.0kb downstream 1.0kb downstream 5656 true scaffold_5: 9198654-9204309 Capsella rubella
Carub.0005s1784 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9203310-9204309 Capsella rubella
Carub.0005s1784 2.0kb upstream 2.0kb upstream 6656 true scaffold_5: 9196654-9203309 Capsella rubella
Carub.0005s1784 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9196654-9198653 Capsella rubella
Carub.0005s1784 2.0kb downstream 2.0kb downstream 6656 true scaffold_5: 9198654-9205309 Capsella rubella
Carub.0005s1784 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9203310-9205309 Capsella rubella
Carub.0005s1784 5.0kb upstream 5.0kb upstream 9656 true scaffold_5: 9193654-9203309 Capsella rubella
Carub.0005s1784 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9193654-9198653 Capsella rubella
Carub.0005s1784 5.0kb downstream 5.0kb downstream 9656 true scaffold_5: 9198654-9208309 Capsella rubella
Carub.0005s1784 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9203310-9208309 Capsella rubella
Carub.0005s1784 10.0kb upstream 10.0kb upstream 14656 true scaffold_5: 9188654-9203309 Capsella rubella
Carub.0005s1784 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9188654-9198653 Capsella rubella
Carub.0005s1784 10.0kb downstream 10.0kb downstream 14656 true scaffold_5: 9198654-9213309 Capsella rubella
Carub.0005s1784 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9203310-9213309 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376117 5261 Brassicaceae View MSA
123828423 5264 Brassicales-Malvales View MSA
124343568 5266 SBM View MSA
124242227 5268 Malvidae View MSA
124069154 5270 Rosid View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain