Gene : Carub.0005s1593 C. rubella v1.1
Defline:  (1 of 1) K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12] (USP48) Genomic Order:  1593
Name:  ? Carub.0005s1593 Secondary Identifier:  ? PAC:39225402
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1593 0.5kb upstream 0.5kb upstream 7437 true scaffold_5: 8459857-8467293 Capsella rubella
Carub.0005s1593 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8466794-8467293 Capsella rubella
Carub.0005s1593 0.5kb downstream 0.5kb downstream 7437 true scaffold_5: 8459357-8466793 Capsella rubella
Carub.0005s1593 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8459357-8459856 Capsella rubella
Carub.0005s1593 1.0kb upstream 1.0kb upstream 7937 true scaffold_5: 8459857-8467793 Capsella rubella
Carub.0005s1593 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8466794-8467793 Capsella rubella
Carub.0005s1593 1.0kb downstream 1.0kb downstream 7937 true scaffold_5: 8458857-8466793 Capsella rubella
Carub.0005s1593 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8458857-8459856 Capsella rubella
Carub.0005s1593 2.0kb upstream 2.0kb upstream 8937 true scaffold_5: 8459857-8468793 Capsella rubella
Carub.0005s1593 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8466794-8468793 Capsella rubella
Carub.0005s1593 2.0kb downstream 2.0kb downstream 8937 true scaffold_5: 8457857-8466793 Capsella rubella
Carub.0005s1593 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8457857-8459856 Capsella rubella
Carub.0005s1593 5.0kb upstream 5.0kb upstream 11937 true scaffold_5: 8459857-8471793 Capsella rubella
Carub.0005s1593 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8466794-8471793 Capsella rubella
Carub.0005s1593 5.0kb downstream 5.0kb downstream 11937 true scaffold_5: 8454857-8466793 Capsella rubella
Carub.0005s1593 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8454857-8459856 Capsella rubella
Carub.0005s1593 10.0kb upstream 10.0kb upstream 16937 true scaffold_5: 8459857-8476793 Capsella rubella
Carub.0005s1593 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8466794-8476793 Capsella rubella
Carub.0005s1593 10.0kb downstream 10.0kb downstream 16937 true scaffold_5: 8449857-8466793 Capsella rubella
Carub.0005s1593 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8449857-8459856 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372614 5261 Brassicaceae View MSA
123831046 5264 Brassicales-Malvales View MSA
124342030 5266 SBM View MSA
124243585 5268 Malvidae View MSA
124061105 5270 Rosid View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain