Gene : Carub.0005s1624 C. rubella v1.1

Defline:  (1 of 2) 3.2.1.145 - Galactan 1,3-beta-galactosidase Genomic Order:  1624
Name:  ? Carub.0005s1624 Secondary Identifier:  ? PAC:39225277

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1624 0.5kb upstream 0.5kb upstream 3009 true scaffold_5: 8583622-8586630 Capsella rubella
Carub.0005s1624 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8583622-8584121 Capsella rubella
Carub.0005s1624 0.5kb downstream 0.5kb downstream 3009 true scaffold_5: 8584122-8587130 Capsella rubella
Carub.0005s1624 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8586631-8587130 Capsella rubella
Carub.0005s1624 1.0kb upstream 1.0kb upstream 3509 true scaffold_5: 8583122-8586630 Capsella rubella
Carub.0005s1624 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8583122-8584121 Capsella rubella
Carub.0005s1624 1.0kb downstream 1.0kb downstream 3509 true scaffold_5: 8584122-8587630 Capsella rubella
Carub.0005s1624 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8586631-8587630 Capsella rubella
Carub.0005s1624 2.0kb upstream 2.0kb upstream 4509 true scaffold_5: 8582122-8586630 Capsella rubella
Carub.0005s1624 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8582122-8584121 Capsella rubella
Carub.0005s1624 2.0kb downstream 2.0kb downstream 4509 true scaffold_5: 8584122-8588630 Capsella rubella
Carub.0005s1624 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8586631-8588630 Capsella rubella
Carub.0005s1624 5.0kb upstream 5.0kb upstream 7509 true scaffold_5: 8579122-8586630 Capsella rubella
Carub.0005s1624 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8579122-8584121 Capsella rubella
Carub.0005s1624 5.0kb downstream 5.0kb downstream 7509 true scaffold_5: 8584122-8591630 Capsella rubella
Carub.0005s1624 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8586631-8591630 Capsella rubella
Carub.0005s1624 10.0kb upstream 10.0kb upstream 12509 true scaffold_5: 8574122-8586630 Capsella rubella
Carub.0005s1624 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8574122-8584121 Capsella rubella
Carub.0005s1624 10.0kb downstream 10.0kb downstream 12509 true scaffold_5: 8584122-8596630 Capsella rubella
Carub.0005s1624 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8586631-8596630 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
122362249 5261 Brassicaceae View MSA
123830768 5264 Brassicales-Malvales View MSA
124349651 5266 SBM View MSA
124237040 5268 Malvidae View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain