Gene : Carub.0005s1640 C. rubella v1.1
Defline:  (1 of 2) PTHR13683//PTHR13683:SF342 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED Genomic Order:  1640
Name:  ? Carub.0005s1640 Secondary Identifier:  ? PAC:39225798
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1640 0.5kb upstream 0.5kb upstream 3585 true scaffold_5: 8636580-8640164 Capsella rubella
Carub.0005s1640 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8639665-8640164 Capsella rubella
Carub.0005s1640 0.5kb downstream 0.5kb downstream 3585 true scaffold_5: 8636080-8639664 Capsella rubella
Carub.0005s1640 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8636080-8636579 Capsella rubella
Carub.0005s1640 1.0kb upstream 1.0kb upstream 4085 true scaffold_5: 8636580-8640664 Capsella rubella
Carub.0005s1640 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8639665-8640664 Capsella rubella
Carub.0005s1640 1.0kb downstream 1.0kb downstream 4085 true scaffold_5: 8635580-8639664 Capsella rubella
Carub.0005s1640 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8635580-8636579 Capsella rubella
Carub.0005s1640 2.0kb upstream 2.0kb upstream 5085 true scaffold_5: 8636580-8641664 Capsella rubella
Carub.0005s1640 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8639665-8641664 Capsella rubella
Carub.0005s1640 2.0kb downstream 2.0kb downstream 5085 true scaffold_5: 8634580-8639664 Capsella rubella
Carub.0005s1640 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8634580-8636579 Capsella rubella
Carub.0005s1640 5.0kb upstream 5.0kb upstream 8085 true scaffold_5: 8636580-8644664 Capsella rubella
Carub.0005s1640 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8639665-8644664 Capsella rubella
Carub.0005s1640 5.0kb downstream 5.0kb downstream 8085 true scaffold_5: 8631580-8639664 Capsella rubella
Carub.0005s1640 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8631580-8636579 Capsella rubella
Carub.0005s1640 10.0kb upstream 10.0kb upstream 13085 true scaffold_5: 8636580-8649664 Capsella rubella
Carub.0005s1640 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8639665-8649664 Capsella rubella
Carub.0005s1640 10.0kb downstream 10.0kb downstream 13085 true scaffold_5: 8626580-8639664 Capsella rubella
Carub.0005s1640 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8626580-8636579 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367489 5261 Brassicaceae View MSA
123828024 5264 Brassicales-Malvales View MSA
124347964 5266 SBM View MSA
124245279 5268 Malvidae View MSA
124072520 5270 Rosid View MSA
123741714 5271 Pentapetalae View MSA
122786782 5272 Eudicot View MSA
122041856 5273 Angiosperm View MSA
121346441 5274 Embryophyte View MSA
123428674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain