Gene : Carub.0005s1942 C. rubella v1.1
Defline:  (1 of 1) 1.3.1.70 - Delta(14)-sterol reductase / Sterol C14-reductase Genomic Order:  1942
Name:  ? Carub.0005s1942 Secondary Identifier:  ? PAC:39226880
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2541 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1942 0.5kb upstream 0.5kb upstream 3584 true scaffold_5: 9766533-9770116 Capsella rubella
Carub.0005s1942 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9769617-9770116 Capsella rubella
Carub.0005s1942 0.5kb downstream 0.5kb downstream 3584 true scaffold_5: 9766033-9769616 Capsella rubella
Carub.0005s1942 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9766033-9766532 Capsella rubella
Carub.0005s1942 1.0kb upstream 1.0kb upstream 4084 true scaffold_5: 9766533-9770616 Capsella rubella
Carub.0005s1942 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9769617-9770616 Capsella rubella
Carub.0005s1942 1.0kb downstream 1.0kb downstream 4084 true scaffold_5: 9765533-9769616 Capsella rubella
Carub.0005s1942 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9765533-9766532 Capsella rubella
Carub.0005s1942 2.0kb upstream 2.0kb upstream 5084 true scaffold_5: 9766533-9771616 Capsella rubella
Carub.0005s1942 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9769617-9771616 Capsella rubella
Carub.0005s1942 2.0kb downstream 2.0kb downstream 5084 true scaffold_5: 9764533-9769616 Capsella rubella
Carub.0005s1942 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9764533-9766532 Capsella rubella
Carub.0005s1942 5.0kb upstream 5.0kb upstream 8084 true scaffold_5: 9766533-9774616 Capsella rubella
Carub.0005s1942 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9769617-9774616 Capsella rubella
Carub.0005s1942 5.0kb downstream 5.0kb downstream 8084 true scaffold_5: 9761533-9769616 Capsella rubella
Carub.0005s1942 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9761533-9766532 Capsella rubella
Carub.0005s1942 10.0kb upstream 10.0kb upstream 13084 true scaffold_5: 9766533-9779616 Capsella rubella
Carub.0005s1942 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9769617-9779616 Capsella rubella
Carub.0005s1942 10.0kb downstream 10.0kb downstream 13084 true scaffold_5: 9756533-9769616 Capsella rubella
Carub.0005s1942 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9756533-9766532 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360509 5261 Brassicaceae View MSA
123833279 5264 Brassicales-Malvales View MSA
124344408 5266 SBM View MSA
124250977 5268 Malvidae View MSA
124062943 5270 Rosid View MSA
123743955 5271 Pentapetalae View MSA
122786047 5272 Eudicot View MSA
122044156 5273 Angiosperm View MSA
121351053 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain