Gene : Carub.0005s1937 C. rubella v1.1
Defline:  (1 of 2) PTHR21470//PTHR21470:SF3 - NTKL-BINDING PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  1937
Name:  ? Carub.0005s1937 Secondary Identifier:  ? PAC:39224844
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1937 0.5kb upstream 0.5kb upstream 1741 true scaffold_5: 9749426-9751166 Capsella rubella
Carub.0005s1937 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9749426-9749925 Capsella rubella
Carub.0005s1937 0.5kb downstream 0.5kb downstream 1741 true scaffold_5: 9749926-9751666 Capsella rubella
Carub.0005s1937 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9751167-9751666 Capsella rubella
Carub.0005s1937 1.0kb upstream 1.0kb upstream 2241 true scaffold_5: 9748926-9751166 Capsella rubella
Carub.0005s1937 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9748926-9749925 Capsella rubella
Carub.0005s1937 1.0kb downstream 1.0kb downstream 2241 true scaffold_5: 9749926-9752166 Capsella rubella
Carub.0005s1937 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9751167-9752166 Capsella rubella
Carub.0005s1937 2.0kb upstream 2.0kb upstream 3241 true scaffold_5: 9747926-9751166 Capsella rubella
Carub.0005s1937 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9747926-9749925 Capsella rubella
Carub.0005s1937 2.0kb downstream 2.0kb downstream 3241 true scaffold_5: 9749926-9753166 Capsella rubella
Carub.0005s1937 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9751167-9753166 Capsella rubella
Carub.0005s1937 5.0kb upstream 5.0kb upstream 6241 true scaffold_5: 9744926-9751166 Capsella rubella
Carub.0005s1937 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9744926-9749925 Capsella rubella
Carub.0005s1937 5.0kb downstream 5.0kb downstream 6241 true scaffold_5: 9749926-9756166 Capsella rubella
Carub.0005s1937 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9751167-9756166 Capsella rubella
Carub.0005s1937 10.0kb upstream 10.0kb upstream 11241 true scaffold_5: 9739926-9751166 Capsella rubella
Carub.0005s1937 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9739926-9749925 Capsella rubella
Carub.0005s1937 10.0kb downstream 10.0kb downstream 11241 true scaffold_5: 9749926-9761166 Capsella rubella
Carub.0005s1937 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9751167-9761166 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376001 5261 Brassicaceae View MSA
123801112 5264 Brassicales-Malvales View MSA
124298449 5266 SBM View MSA
124245895 5268 Malvidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain