Gene : Carub.0005s1939 C. rubella v1.1
Defline:  (1 of 2) PTHR31602:SF12 - GROWTH-REGULATING FACTOR 3-RELATED Genomic Order:  1939
Name:  ? Carub.0005s1939 Secondary Identifier:  ? PAC:39225861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1939 0.5kb upstream 0.5kb upstream 2886 true scaffold_5: 9753134-9756019 Capsella rubella
Carub.0005s1939 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9755520-9756019 Capsella rubella
Carub.0005s1939 0.5kb downstream 0.5kb downstream 2886 true scaffold_5: 9752634-9755519 Capsella rubella
Carub.0005s1939 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9752634-9753133 Capsella rubella
Carub.0005s1939 1.0kb upstream 1.0kb upstream 3386 true scaffold_5: 9753134-9756519 Capsella rubella
Carub.0005s1939 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9755520-9756519 Capsella rubella
Carub.0005s1939 1.0kb downstream 1.0kb downstream 3386 true scaffold_5: 9752134-9755519 Capsella rubella
Carub.0005s1939 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9752134-9753133 Capsella rubella
Carub.0005s1939 2.0kb upstream 2.0kb upstream 4386 true scaffold_5: 9753134-9757519 Capsella rubella
Carub.0005s1939 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9755520-9757519 Capsella rubella
Carub.0005s1939 2.0kb downstream 2.0kb downstream 4386 true scaffold_5: 9751134-9755519 Capsella rubella
Carub.0005s1939 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9751134-9753133 Capsella rubella
Carub.0005s1939 5.0kb upstream 5.0kb upstream 7386 true scaffold_5: 9753134-9760519 Capsella rubella
Carub.0005s1939 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9755520-9760519 Capsella rubella
Carub.0005s1939 5.0kb downstream 5.0kb downstream 7386 true scaffold_5: 9748134-9755519 Capsella rubella
Carub.0005s1939 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9748134-9753133 Capsella rubella
Carub.0005s1939 10.0kb upstream 10.0kb upstream 12386 true scaffold_5: 9753134-9765519 Capsella rubella
Carub.0005s1939 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9755520-9765519 Capsella rubella
Carub.0005s1939 10.0kb downstream 10.0kb downstream 12386 true scaffold_5: 9743134-9755519 Capsella rubella
Carub.0005s1939 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9743134-9753133 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363756 5261 Brassicaceae View MSA
123798605 5264 Brassicales-Malvales View MSA
124296217 5266 SBM View MSA
124250974 5268 Malvidae View MSA
124066495 5270 Rosid View MSA
123749792 5271 Pentapetalae View MSA
122797336 5272 Eudicot View MSA
122049590 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain