Gene : Carub.0005s1986 C. rubella v1.1
Defline:  (1 of 95) PF02362 - B3 DNA binding domain (B3) Genomic Order:  1986
Name:  ? Carub.0005s1986 Secondary Identifier:  ? PAC:39225430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1986 0.5kb upstream 0.5kb upstream 2145 true scaffold_5: 9907019-9909163 Capsella rubella
Carub.0005s1986 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9908664-9909163 Capsella rubella
Carub.0005s1986 0.5kb downstream 0.5kb downstream 2145 true scaffold_5: 9906519-9908663 Capsella rubella
Carub.0005s1986 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9906519-9907018 Capsella rubella
Carub.0005s1986 1.0kb upstream 1.0kb upstream 2645 true scaffold_5: 9907019-9909663 Capsella rubella
Carub.0005s1986 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9908664-9909663 Capsella rubella
Carub.0005s1986 1.0kb downstream 1.0kb downstream 2645 true scaffold_5: 9906019-9908663 Capsella rubella
Carub.0005s1986 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9906019-9907018 Capsella rubella
Carub.0005s1986 2.0kb upstream 2.0kb upstream 3645 true scaffold_5: 9907019-9910663 Capsella rubella
Carub.0005s1986 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9908664-9910663 Capsella rubella
Carub.0005s1986 2.0kb downstream 2.0kb downstream 3645 true scaffold_5: 9905019-9908663 Capsella rubella
Carub.0005s1986 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9905019-9907018 Capsella rubella
Carub.0005s1986 5.0kb upstream 5.0kb upstream 6645 true scaffold_5: 9907019-9913663 Capsella rubella
Carub.0005s1986 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9908664-9913663 Capsella rubella
Carub.0005s1986 5.0kb downstream 5.0kb downstream 6645 true scaffold_5: 9902019-9908663 Capsella rubella
Carub.0005s1986 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9902019-9907018 Capsella rubella
Carub.0005s1986 10.0kb upstream 10.0kb upstream 11645 true scaffold_5: 9907019-9918663 Capsella rubella
Carub.0005s1986 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9908664-9918663 Capsella rubella
Carub.0005s1986 10.0kb downstream 10.0kb downstream 11645 true scaffold_5: 9897019-9908663 Capsella rubella
Carub.0005s1986 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9897019-9907018 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378698 5261 Brassicaceae View MSA
123841668 5264 Brassicales-Malvales View MSA
124350666 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain