Gene : Carub.0005s1979 C. rubella v1.1
Defline:  (1 of 2) PTHR31374:SF45 - AUXIN-RESPONSIVE FAMILY PROTEIN Genomic Order:  1979
Name:  ? Carub.0005s1979 Secondary Identifier:  ? PAC:39226918
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1979 0.5kb upstream 0.5kb upstream 875 true scaffold_5: 9883100-9883974 Capsella rubella
Carub.0005s1979 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9883100-9883599 Capsella rubella
Carub.0005s1979 0.5kb downstream 0.5kb downstream 875 true scaffold_5: 9883600-9884474 Capsella rubella
Carub.0005s1979 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9883975-9884474 Capsella rubella
Carub.0005s1979 1.0kb upstream 1.0kb upstream 1375 true scaffold_5: 9882600-9883974 Capsella rubella
Carub.0005s1979 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9882600-9883599 Capsella rubella
Carub.0005s1979 1.0kb downstream 1.0kb downstream 1375 true scaffold_5: 9883600-9884974 Capsella rubella
Carub.0005s1979 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9883975-9884974 Capsella rubella
Carub.0005s1979 2.0kb upstream 2.0kb upstream 2375 true scaffold_5: 9881600-9883974 Capsella rubella
Carub.0005s1979 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9881600-9883599 Capsella rubella
Carub.0005s1979 2.0kb downstream 2.0kb downstream 2375 true scaffold_5: 9883600-9885974 Capsella rubella
Carub.0005s1979 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9883975-9885974 Capsella rubella
Carub.0005s1979 5.0kb upstream 5.0kb upstream 5375 true scaffold_5: 9878600-9883974 Capsella rubella
Carub.0005s1979 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9878600-9883599 Capsella rubella
Carub.0005s1979 5.0kb downstream 5.0kb downstream 5375 true scaffold_5: 9883600-9888974 Capsella rubella
Carub.0005s1979 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9883975-9888974 Capsella rubella
Carub.0005s1979 10.0kb upstream 10.0kb upstream 10375 true scaffold_5: 9873600-9883974 Capsella rubella
Carub.0005s1979 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9873600-9883599 Capsella rubella
Carub.0005s1979 10.0kb downstream 10.0kb downstream 10375 true scaffold_5: 9883600-9893974 Capsella rubella
Carub.0005s1979 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9883975-9893974 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374720 5261 Brassicaceae View MSA
123800811 5264 Brassicales-Malvales View MSA
124349849 5266 SBM View MSA
124253821 5268 Malvidae View MSA
124066016 5270 Rosid View MSA
123737947 5271 Pentapetalae View MSA
122793585 5272 Eudicot View MSA
122045137 5273 Angiosperm View MSA
121310404 5274 Embryophyte View MSA
123347894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain