Gene : Carub.0005s2000 C. rubella v1.1
Defline:  (1 of 3) K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Genomic Order:  2000
Name:  ? Carub.0005s2000 Secondary Identifier:  ? PAC:39225701
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2000 0.5kb upstream 0.5kb upstream 1462 true scaffold_5: 9955695-9957156 Capsella rubella
Carub.0005s2000 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9956657-9957156 Capsella rubella
Carub.0005s2000 0.5kb downstream 0.5kb downstream 1462 true scaffold_5: 9955195-9956656 Capsella rubella
Carub.0005s2000 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9955195-9955694 Capsella rubella
Carub.0005s2000 1.0kb upstream 1.0kb upstream 1962 true scaffold_5: 9955695-9957656 Capsella rubella
Carub.0005s2000 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9956657-9957656 Capsella rubella
Carub.0005s2000 1.0kb downstream 1.0kb downstream 1962 true scaffold_5: 9954695-9956656 Capsella rubella
Carub.0005s2000 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9954695-9955694 Capsella rubella
Carub.0005s2000 2.0kb upstream 2.0kb upstream 2962 true scaffold_5: 9955695-9958656 Capsella rubella
Carub.0005s2000 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9956657-9958656 Capsella rubella
Carub.0005s2000 2.0kb downstream 2.0kb downstream 2962 true scaffold_5: 9953695-9956656 Capsella rubella
Carub.0005s2000 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9953695-9955694 Capsella rubella
Carub.0005s2000 5.0kb upstream 5.0kb upstream 5962 true scaffold_5: 9955695-9961656 Capsella rubella
Carub.0005s2000 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9956657-9961656 Capsella rubella
Carub.0005s2000 5.0kb downstream 5.0kb downstream 5962 true scaffold_5: 9950695-9956656 Capsella rubella
Carub.0005s2000 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9950695-9955694 Capsella rubella
Carub.0005s2000 10.0kb upstream 10.0kb upstream 10962 true scaffold_5: 9955695-9966656 Capsella rubella
Carub.0005s2000 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9956657-9966656 Capsella rubella
Carub.0005s2000 10.0kb downstream 10.0kb downstream 10962 true scaffold_5: 9945695-9956656 Capsella rubella
Carub.0005s2000 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9945695-9955694 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378624 5261 Brassicaceae View MSA
123830752 5264 Brassicales-Malvales View MSA
124350930 5266 SBM View MSA
124254626 5268 Malvidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain